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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55604.1
DDBJ      :             putative siderophore-interacting protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  103/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.43.4
:235 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   20->235 2gpjA PDBj 7e-14 32.5 %
:RPS:PDB   18->228 1cneA PDBj 2e-11 11.0 %
:RPS:SCOP  18->108 1a8pA1  b.43.4.2 * 3e-09 17.4 %
:HMM:SCOP  12->117 1gvhA2 b.43.4.2 * 4.7e-10 26.7 %
:RPS:PFM   30->107 PF08021 * FAD_binding_9 2e-08 45.9 %
:RPS:PFM   130->235 PF04954 * SIP 1e-09 31.4 %
:HMM:PFM   124->235 PF04954 * SIP 3.2e-22 27.9 111/119  
:HMM:PFM   21->110 PF08021 * FAD_binding_9 3.1e-19 38.9 90/117  
:BLT:SWISS 1->234 Y1383_MYCBO 6e-35 32.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55604.1 GT:GENE BAD55604.1 GT:PRODUCT putative siderophore-interacting protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(818712..819419) GB:FROM 818712 GB:TO 819419 GB:DIRECTION - GB:PRODUCT putative siderophore-interacting protein GB:PROTEIN_ID BAD55604.1 LENGTH 235 SQ:AASEQ MGKGFNGVLVKAWGGDDYTLTVTSSEYVTDKYIRLGFTGGGLLANHPVHPTQWIRLWIPDEHSDKLHHRGYTLVDQDPEADRFFIEFALHGGPACRWAERAAVGDTLDATVLGSNFSLPETTPSEYVVFGDTASLPAINTLLDAIGDTPARVWLEWQYESDQKLPLRNKPHHQVTWLQRVDDGRLLREAAQEMSCPADAFAWVACDGHTTRSIVKTLKHAHGLPKTAIKYQAYWK GT:EXON 1|1-235:0| BL:SWS:NREP 1 BL:SWS:REP 1->234|Y1383_MYCBO|6e-35|32.3|232/859| BL:PDB:NREP 1 BL:PDB:REP 20->235|2gpjA|7e-14|32.5|206/240| RP:PDB:NREP 1 RP:PDB:REP 18->228|1cneA|2e-11|11.0|209/260| RP:PFM:NREP 2 RP:PFM:REP 30->107|PF08021|2e-08|45.9|74/117|FAD_binding_9| RP:PFM:REP 130->235|PF04954|1e-09|31.4|105/118|SIP| HM:PFM:NREP 2 HM:PFM:REP 124->235|PF04954|3.2e-22|27.9|111/119|SIP| HM:PFM:REP 21->110|PF08021|3.1e-19|38.9|90/117|FAD_binding_9| RP:SCP:NREP 1 RP:SCP:REP 18->108|1a8pA1|3e-09|17.4|86/99|b.43.4.2| HM:SCP:REP 12->117|1gvhA2|4.7e-10|26.7|105/107|b.43.4.2|1/1|Riboflavin synthase domain-like| OP:NHOMO 117 OP:NHOMOORG 103 OP:PATTERN -------------------------------------------------------------------- --------111---21111-11--12111111111112----11-2--1---1--1-1--11--232-16-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------1-------------------------------------1-------1-11---11111111--------------------------------------------11---------1111----1111-1--11111------------1-1--1-----1------------------------------------------11-------------------------------------1---1111---1111----1------------------1----------------------------------------------------------------------------------------------1---------------------------------1111-1111--11------------------------1211111------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 223 STR:RPRED 94.9 SQ:SECSTR ############EEEEccccEEEEEccccTTEEEEEEEcccTTccccccTTcccccccccTTTTccccccccccccTTcccEEEEEEEccccHHHHHHHHccTTcccccccccccccccEEEccEEEEcccccccHHHHHHHHcTTTcccEEEEcEEcccTTccTTcHHTEEccEEccccccccccHHHHHTTccTTTcEEcccccTHHHHTTTccHHHHTTcccTTTcccccEH DISOP:02AL 1-2| PSIPRED ccccccEEEEEEEccccEEEEEEEEEEccccEEEEEEcccccccccccccccEEEEEEcccccccccEEEEEEEEccccccEEEEEEEEccccHHHHHHHcccccEEEEEccccccccccccccEEEEEEccHHHHHHHHHHHHcccccEEEEEEEEccHHHHHHHccccccEEEEEEccccHHHHHHHHHHcccccccEEEEEcHHHHHHHHHHHHHHHHcccHHHcEEEEEEc //