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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55627.1
DDBJ      :             putative two-component system sensor kinase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  288/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.274.1d.122.1
:349 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   153->341 3gigA PDBj 1e-09 29.8 %
:RPS:PDB   153->272 3ehfB PDBj 5e-15 37.0 %
:RPS:SCOP  91->137 2aswA1  a.274.1.1 * 8e-04 10.6 %
:RPS:SCOP  211->342 2c2aA2  d.122.1.3 * 6e-04 14.4 %
:HMM:SCOP  216->342 1b3qA3 d.122.1.3 * 1.1e-14 25.2 %
:RPS:PFM   153->214 PF07730 * HisKA_3 2e-07 50.0 %
:HMM:PFM   153->217 PF07730 * HisKA_3 1.2e-20 49.2 65/68  
:HMM:PFM   261->342 PF02518 * HATPase_c 3.1e-09 22.0 82/111  
:HMM:PFM   71->136 PF00672 * HAMP 3.7e-10 37.1 62/70  
:BLT:SWISS 114->341 NREB_STAAR 6e-19 29.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55627.1 GT:GENE BAD55627.1 GT:PRODUCT putative two-component system sensor kinase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(850898..851947) GB:FROM 850898 GB:TO 851947 GB:DIRECTION - GB:PRODUCT putative two-component system sensor kinase GB:PROTEIN_ID BAD55627.1 LENGTH 349 SQ:AASEQ MDTPGPSGHTGRMQAAVRALGRFRRHTRTPADTLFRRIFLINGLVFTVGTLVLALSPATVSARVRLAEIPVLVVGLAVILAANAVLLRTSLAPLDTLIASMRRVDPLRRSGRLDAPVHGDLAQLIEAFNAMVDRLESERTTASASALAAQEGERRRIARELHDEIGQSLTVALLSMKRAIDKAPGPAGEELRGAQETVRACLDEVRGIARRLRPDVLDDLGLASALNALCAEVAATAGIEVTREIDRALPRLGPDVELVCYRVAQEALTNVVRHAAAHRALLRLHASADLIELRVRDDGRGGLTTDGAGIRGMRERALLVDATLTIDSPPGGGTDIALAIPRTDQGSRS GT:EXON 1|1-349:0| BL:SWS:NREP 1 BL:SWS:REP 114->341|NREB_STAAR|6e-19|29.5|224/344| SEG 71->87|vlvvglavilaanavll| SEG 273->286|rhaaahrallrlha| SEG 293->309|lrvrddgrgglttdgag| BL:PDB:NREP 1 BL:PDB:REP 153->341|3gigA|1e-09|29.8|181/212| RP:PDB:NREP 1 RP:PDB:REP 153->272|3ehfB|5e-15|37.0|92/101| RP:PFM:NREP 1 RP:PFM:REP 153->214|PF07730|2e-07|50.0|62/68|HisKA_3| HM:PFM:NREP 3 HM:PFM:REP 153->217|PF07730|1.2e-20|49.2|65/68|HisKA_3| HM:PFM:REP 261->342|PF02518|3.1e-09|22.0|82/111|HATPase_c| HM:PFM:REP 71->136|PF00672|3.7e-10|37.1|62/70|HAMP| GO:PFM:NREP 4 GO:PFM GO:0000155|"GO:two-component sensor activity"|PF07730|IPR011712| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF07730|IPR011712| GO:PFM GO:0016021|"GO:integral to membrane"|PF07730|IPR011712| GO:PFM GO:0046983|"GO:protein dimerization activity"|PF07730|IPR011712| RP:SCP:NREP 2 RP:SCP:REP 91->137|2aswA1|8e-04|10.6|47/54|a.274.1.1| RP:SCP:REP 211->342|2c2aA2|6e-04|14.4|132/151|d.122.1.3| HM:SCP:REP 216->342|1b3qA3|1.1e-14|25.2|127/185|d.122.1.3|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 553 OP:NHOMOORG 290 OP:PATTERN -------------------------------------------------------------------- 257131-----11-1------1---4------22321364------11-112---1-----1213-2174----------1--------------------1-1-433-2--------------------------43354343511--2-----------------213-------------21121---222---------------232211---11121-11----1351111111111111111221-1---22-1--111-111-----------------11---------------------------------1---2-----------1-------1-1--5--1-53-11-11--1-1-----1-1---------32-2--12122211-111-1-11-32-23-43-1--11111--111-----1-1------111------------1-------------------------------------------2223212111133464434132341531--442432--2233332312422---------11-223-22---11-3---1-3-3--2--322121--4---------------------------------2-11-1------1------12-11----1------------------------------------------------11--------------------------------------------1---------1-1---------------------------1-11112423233322222-------------222222111112121211112-------------------------------------------------------------2- -------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------2---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 223 STR:RPRED 63.9 SQ:SECSTR #######################################################################################################################TcHHHHHHHHHHHHHHTcHHHHHHHEEEEHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcHHHHHHHTHHHHHHTTcTcEEccccccccccccccHHHHHHHHHHHHHHcHHTcccEEEEEEEEcccEEEEEEEEcccccccTTcccHHHHHHHHHHTTcEEEEEccccEEEEEEEEEEc####### DISOP:02AL 1-6, 180-188, 344-349| PSIPRED ccccccccccccHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEccEEEEEEEEccccccccccccHHHHHHHHHHHccEEEEEEcccccEEEEEEEEcccccccc //