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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55629.1
DDBJ      :             putative transporter
Swiss-Prot:             

Homologs  Archaea  14/68 : Bacteria  200/915 : Eukaryota  66/199 : Viruses  0/175   --->[See Alignment]
:427 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   5->343 PF03600 * CitMHS 1e-20 30.1 %
:HMM:PFM   7->352 PF03600 * CitMHS 3.2e-57 30.9 317/349  
:BLT:SWISS 4->427 Y2685_MYCTU 1e-95 48.7 %
:TM
:REPEAT 2|54->123|276->345
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55629.1 GT:GENE BAD55629.1 GT:PRODUCT putative transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 852427..853710 GB:FROM 852427 GB:TO 853710 GB:DIRECTION + GB:PRODUCT putative transporter GB:PROTEIN_ID BAD55629.1 LENGTH 427 SQ:AASEQ MHQLLALTIFAAAFWCIATERFDKVATVLVAAALMALTGVIPGDEVFYDPHAGIDWNVVFLLLGMMIIVGVVKQTGLFDCLAIWAAKRSRGDPFRLMVLLMTITAVASPILDNVTIILLIAPVTIVVCDRLRLPAQPFLIAEVLAANIGGAATLVGDPPNIIIGSRAGLSFNDFLIHMAPAVAVIFALFVVFTRFLFRAHLRDRAADVTAVLALEERHAITDPRLLRRSLLVLAGVVVGFGLHTVVHVAPSIVALLGAGAMLLVADLEVGTVLREVEWGTLVFFMGLFVIVAGLIHTGVVDRLAAVAVGAFGDDPVLSSAALVFGSAIAGAFIDNIPYTTTVAPVVEELVAQAPDHATGQALWWSFAFGADFSGNGTAVAAGANVVALGIARRAGHPITFWQFTKYGVVVTALSTTLAWLYVWVRYF GT:EXON 1|1-427:0| BL:SWS:NREP 1 BL:SWS:REP 4->427|Y2685_MYCTU|1e-95|48.7|421/428| TM:NTM 10 TM:REGION 26->47| TM:REGION 52->74| TM:REGION 100->122| TM:REGION 134->156| TM:REGION 171->193| TM:REGION 229->251| TM:REGION 284->306| TM:REGION 315->337| TM:REGION 376->391| TM:REGION 403->424| NREPEAT 1 REPEAT 2|54->123|276->345| SEG 25->38|vatvlvaaalmalt| SEG 179->192|apavavifalfvvf| SEG 224->242|rllrrsllvlagvvvgfgl| SEG 253->265|vallgagamllva| SEG 374->387|gngtavaaganvva| RP:PFM:NREP 1 RP:PFM:REP 5->343|PF03600|1e-20|30.1|329/340|CitMHS| HM:PFM:NREP 1 HM:PFM:REP 7->352|PF03600|3.2e-57|30.9|317/349|CitMHS| GO:PFM:NREP 4 GO:PFM GO:0015137|"GO:citrate transmembrane transporter activity"|PF03600|IPR004680| GO:PFM GO:0015746|"GO:citrate transport"|PF03600|IPR004680| GO:PFM GO:0016021|"GO:integral to membrane"|PF03600|IPR004680| GO:PFM GO:0055085|"GO:transmembrane transport"|PF03600|IPR004680| OP:NHOMO 386 OP:NHOMOORG 280 OP:PATTERN 11-221----------1------1------------------1---2-------1-2111-------- 111------------1122-2-1121222221-1111------------------------------------------1112--1--111--1------1-----------------------------------11111--11--12-111-111-------11-212-------------1--------1-222222222222222-1----222-1--111------11-----------------------------------------------------------------------------------------------1111111-1--1--1---------1-2---2422--3-11---2--11----------1--------------------------------1--1-----------------------------------------------------------------------------1----------1-------1------1-----------------------------1-----------------111-111----------1-------1111----------------------------------------------------------------------11---1-1111111111-1111111111111111111111-----11111-1111111111-11-1111--1-----------------------------111---1---------------------------------------------------------------11-11111----------------------1---------------------------2423321222-1- ----111-------1--------------------------------------------------------------------------------------------1-1211121-111111111-21341-31111111111221-1-1--1-1111-----1-1C225--1-----8111--3461-1211----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 427-428| PSIPRED cHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccHHHHHHcccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcc //