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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55641.1
DDBJ      :             putative methionine aminopeptidase
Swiss-Prot:             

Homologs  Archaea  11/68 : Bacteria  906/915 : Eukaryota  189/199 : Viruses  0/175   --->[See Alignment]
d.127.1
:266 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   42->262 1o0xA PDBj 1e-37 38.1 %
:RPS:PDB   41->266 2bb7A PDBj 5e-42 32.7 %
:RPS:SCOP  41->266 1b59A2  d.127.1.1 * 2e-44 24.3 %
:HMM:SCOP  10->264 1o0xA_ d.127.1.1 * 4.7e-70 45.0 %
:RPS:PFM   41->159 PF00557 * Peptidase_M24 2e-13 44.2 %
:HMM:PFM   21->255 PF00557 * Peptidase_M24 2.6e-43 37.4 198/203  
:BLT:SWISS 41->262 AMPM_CLOAB 5e-54 48.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55641.1 GT:GENE BAD55641.1 GT:PRODUCT putative methionine aminopeptidase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 860331..861131 GB:FROM 860331 GB:TO 861131 GB:DIRECTION + GB:PRODUCT putative methionine aminopeptidase GB:PROTEIN_ID BAD55641.1 LENGTH 266 SQ:AASEQ MVFGRKNKKVVPFRTAGELDAMAAAGAVVGRALVAVRAAAKPGVSTLELDEVAEQTIREAGAVPSFKGYHGFPGSICSSVNDRVVHGIPSAEEILAEGDLVSIDCGAILDGWHGDSAWTFGVGSIIEADRLLSEATRISMEAGIAAMVPGNRLTDVSHAIELGTRAAEQEHGRAYGIVDGYGGHGIGREMHMDPFLANEGEPGRGPQLVVGSVLAIEPMLTLGTTQTKVLDDDWTVVTVDGSRAAHWEHTVAVTEDGPRILTPRPE GT:EXON 1|1-266:0| BL:SWS:NREP 1 BL:SWS:REP 41->262|AMPM_CLOAB|5e-54|48.1|216/250| SEG 21->40|amaaagavvgralvavraaa| SEG 175->187|ygivdgygghgig| SEG 227->240|tkvldddwtvvtvd| BL:PDB:NREP 1 BL:PDB:REP 42->262|1o0xA|1e-37|38.1|215/249| RP:PDB:NREP 1 RP:PDB:REP 41->266|2bb7A|5e-42|32.7|220/258| RP:PFM:NREP 1 RP:PFM:REP 41->159|PF00557|2e-13|44.2|113/203|Peptidase_M24| HM:PFM:NREP 1 HM:PFM:REP 21->255|PF00557|2.6e-43|37.4|198/203|Peptidase_M24| GO:PFM:NREP 1 GO:PFM GO:0009987|"GO:cellular process"|PF00557|IPR000994| RP:SCP:NREP 1 RP:SCP:REP 41->266|1b59A2|2e-44|24.3|210/281|d.127.1.1| HM:SCP:REP 10->264|1o0xA_|4.7e-70|45.0|249/249|d.127.1.1|1/1|Creatinase/aminopeptidase| OP:NHOMO 1652 OP:NHOMOORG 1106 OP:PATTERN --------------------1---1------------------1----------11111111------ 1221322222222232222-23222422222233333343121232323223433224113332424433211111111122111111222212111--11211132212111111111111111111111111111111111122123122222111111112312222211111111111112111111112333333332333333312222334222122211111133111111111111111111111121111111111111111111111111111111111111111111111111111111111111111111112-3222222222223222222211111221122121211111111111211111211111112111111111111111111112-222221221121222222222222212211131111111111111111111112111111111111111111111111111111111211111112223222222222222222222231111111111111122122112112112111111111111122111212111211111111111114323221111-1111111111111111111111111111121121111111111222111111111-1111111111111111211111111111-11111111111111111112221121211111111111111112111111111222222211222111111111222211212111111111111111222222211111222222222122212221111111111111111111111112221211111111111122211111111111111111111-11111111111111111111111111111111 2211233-411-2221111222122222211111111111111111111111111111111111111111111111111111111111-14212322222211333-2213232232212322233121382122411-131242222-11113-221211-2222-223-11232224X3232275651542453334 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 226 STR:RPRED 85.0 SQ:SECSTR ########################################cTTccHHHHHHHHHHHHHHTccEEccTTGGGcccccEEEETTEEEcccccTTccccTTcEEEEEEEEEETTEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHccTTccHHHHHHHHHHHHHHTTcEEccHcEEcccccEEEccccccEEEEEcccccTTccccccTTcEEEEccEEEcccccEEEcTTcccEEETTcccEEEccEEEEEcccEEEETTccTT PSIPRED ccccccccEEHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccEEEEcccccccccccccccEEccccEEEEEEEEEEccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEccccccccccEEccccEEEEccccccccccEEEcccccEEEEcccccEEEEEEEEEEcccccEEcccccc //