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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55658.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.1.29c.37.1
:596 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  78->116 1uf9A  c.37.1.1 * 2e-04 37.8 %
:RPS:SCOP  95->142 1vkfA  c.1.29.1 * 3e-04 28.6 %
:HMM:PFM   222->290 PF06013 * WXG100 4.7e-06 25.0 68/86  
:HMM:PFM   414->469 PF09333 * ATG_C 0.00026 21.4 56/98  
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55658.1 GT:GENE BAD55658.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 902258..904048 GB:FROM 902258 GB:TO 904048 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55658.1 LENGTH 596 SQ:AASEQ MAEPNPYEGLRSAAQNRVFKIDEQVATDAVKIIADAMDIMEFAAGDFKADAPGGQLSQGEQAAYDQLYKDIKTVDHFGNLGSGKTLSKAFQDLGIELMDTTLPAFKKSLRDLAEAFIIAGGMVKNQEDTSESVFNALKNESAAAGEVHHVGMRRHGDRYISNDPVIPTNVGGESYSGRPLDAKAPGMRSINTFLEPAASLTYPVANSLRNSLEGRINGLTMLAGEWQRMADRLTIGFNNMARGMTGLTESRWRGDSAEQGMGAVNRYSAAAGQLTTAMNHVGTLLENASAWMSKFYAELPDAPVAASDTAENQAVTRAQAAFTAWYAPGVTASSVLPELPGPTGIQGQNPGPRETVPTGNPTGNPTSPTGSPSPNQLQPAFTPVSQNQPNAQLAQLQSQASQQDKALRDLAAQQAAAQQAAQQAAAQQSAQQAAQQAAQQAQQALQQGLQGAQQAIQEGLQGAQQNMQPAGLAGLPGSLSDLQKDLAKKGGGGGAGKGAGGGGGGLPGGANPKDLAATSKLFPRASLPTTTGMEAARAGIAATPGMPGAPGAMGAAGQGANQGQKEYKRADYLDSVEHLEEALGEAPIVVKPVVEK GT:EXON 1|1-596:0| COIL:NAA 66 COIL:NSEG 1 COIL:REGION 392->457| SEG 357->375|ptgnptgnptsptgspspn| SEG 385->403|sqnqpnaqlaqlqsqasqq| SEG 410->465|laaqqaaaqqaaqqaaaqqsaqqaaqqaaqqaqqalqqglqgaqqaiqeglqgaqq| SEG 487->510|akkgggggagkgagggggglpgga| SEG 538->564|agiaatpgmpgapgamgaagqganqgq| HM:PFM:NREP 2 HM:PFM:REP 222->290|PF06013|4.7e-06|25.0|68/86|WXG100| HM:PFM:REP 414->469|PF09333|0.00026|21.4|56/98|ATG_C| RP:SCP:NREP 2 RP:SCP:REP 78->116|1uf9A|2e-04|37.8|37/191|c.37.1.1| RP:SCP:REP 95->142|1vkfA|3e-04|28.6|42/172|c.1.29.1| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-5, 297-573| PSIPRED cccccHHHHHHHHHHHcEEHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccccccHHHcccEEEccccccccccccccccccccccccccccccccEEEccccccHHHccHHHHHHHHHHHcccHHcHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccEEEcccccc //