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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55671.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  149/915 : Eukaryota  64/199 : Viruses  1/175   --->[See Alignment]
a.118.8c.37.1
:613 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   319->502 1ixsB PDBj 1e-05 40.3 %
:RPS:PDB   30->260 3cv0A PDBj 5e-09 10.0 %
:RPS:PDB   308->381 1dooE PDBj 3e-08 27.4 %
:RPS:PDB   363->508 2dhrD PDBj 3e-10 24.8 %
:RPS:SCOP  22->260 1w3bA  a.118.8.1 * 9e-11 17.3 %
:RPS:SCOP  308->465 1do0A  c.37.1.20 * 2e-12 18.9 %
:HMM:SCOP  106->345 2c2lA1 a.118.8.1 * 1.2e-07 18.5 %
:HMM:SCOP  300->531 1qvrA2 c.37.1.20 * 4.9e-30 27.6 %
:RPS:PFM   102->148 PF02211 * NHase_beta 9e-04 45.7 %
:RPS:PFM   353->379 PF07724 * AAA_2 4e-04 53.8 %
:RPS:PFM   363->475 PF00004 * AAA 5e-09 34.7 %
:HMM:PFM   360->493 PF00004 * AAA 1.6e-20 28.7 122/130  
:HMM:PFM   228->258 PF07719 * TPR_2 7.5e-05 32.3 31/34  
:HMM:PFM   317->377 PF01695 * IstB 0.00015 24.1 58/178  
:BLT:SWISS 38->609 Y055_MYCLE e-101 42.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55671.1 GT:GENE BAD55671.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(913744..915585) GB:FROM 913744 GB:TO 915585 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55671.1 LENGTH 613 SQ:AASEQ MSGNRQAQRAFDAGVLSLGLTIDGQESTRDLEYAKLAFQRATEWDPTMCDAWLGRAAAGEVTGEVLHNLYKTSTTTLFREQRRLGLPPRALSGRFLSGLYIDYPLASYTEIWLAKAAHLISEKEFGEAEQVLDELAEHRRRVSTPEPERVADDRICAYVRGVLHFTTQRWPDVMSVLAGSAEWDDPYLAAGAHVMVGTACAQLGLFGEAIRRLEQAEAGPIPAARTTAMYSRGLCLRETGEEDKAQALFEKVYSQSPDFAANTAAMRDRTYRITVTTKEVIDARTDKWDPASAPSAEQMRNADAEDRAKKILAEARAELDRQIGLESVKTQVAKLQATAQLAKIRAEKGMASVPRGNHLAFTGPPGTGKTTIARVVAKIYCGVGLLKTDKVVEAKRMDFVGQHLGSTAIKTDKLIDSAMDGVLFIDEAYTLIQTGLSGGDAFGREAVDTLLARMENDRDRLVVIIAGYDGEIDRLLAANDGLASRFAKRLQFPSYTPTELGQIGKLIASSRDSELSDEALALLEQACDGLYHSERIDQSGQPRRGIDLAGNGRFVRNVIEAAEEEREFRLANDDSLDLSTVDASVLMRIEAADMRAALAGVLSSLGVTDLPTA GT:EXON 1|1-613:0| BL:SWS:NREP 1 BL:SWS:REP 38->609|Y055_MYCLE|e-101|42.7|532/573| SEG 512->524|dselsdealalle| SEG 560->569|eaaeeerefr| BL:PDB:NREP 1 BL:PDB:REP 319->502|1ixsB|1e-05|40.3|149/315| RP:PDB:NREP 3 RP:PDB:REP 30->260|3cv0A|5e-09|10.0|221/300| RP:PDB:REP 308->381|1dooE|3e-08|27.4|73/393| RP:PDB:REP 363->508|2dhrD|3e-10|24.8|133/445| RP:PFM:NREP 3 RP:PFM:REP 102->148|PF02211|9e-04|45.7|46/201|NHase_beta| RP:PFM:REP 353->379|PF07724|4e-04|53.8|26/160|AAA_2| RP:PFM:REP 363->475|PF00004|5e-09|34.7|101/123|AAA| HM:PFM:NREP 3 HM:PFM:REP 360->493|PF00004|1.6e-20|28.7|122/130|AAA| HM:PFM:REP 228->258|PF07719|7.5e-05|32.3|31/34|TPR_2| HM:PFM:REP 317->377|PF01695|0.00015|24.1|58/178|IstB| GO:PFM:NREP 5 GO:PFM GO:0006807|"GO:nitrogen compound metabolic process"|PF02211|IPR003168| GO:PFM GO:0018822|"GO:nitrile hydratase activity"|PF02211|IPR003168| GO:PFM GO:0046914|"GO:transition metal ion binding"|PF02211|IPR003168| GO:PFM GO:0005524|"GO:ATP binding"|PF07724|IPR013093| GO:PFM GO:0005524|"GO:ATP binding"|PF00004|IPR003959| RP:SCP:NREP 2 RP:SCP:REP 22->260|1w3bA|9e-11|17.3|197/388|a.118.8.1| RP:SCP:REP 308->465|1do0A|2e-12|18.9|148/406|c.37.1.20| HM:SCP:REP 106->345|2c2lA1|1.2e-07|18.5|200/0|a.118.8.1|2/2|TPR-like| HM:SCP:REP 300->531|1qvrA2|4.9e-30|27.6|210/0|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 357 OP:NHOMOORG 214 OP:PATTERN -------------------------------------------------------------------- --------------13345-53443244444223241----3--11------111-----11----13231----------3----------------------------------------------------------------12--11-----11111-----11-1-1-----1------------11111111-2111111212211111121111111------21------------------------------1-----1-2--------------1-------------------------------------1--------1-1-------1-1----112-1-1211221111111------1---------1112221-11111--------------2----21-------------11-1-----11111-----------3---1-1-------------------------------------------------------1--------11-2-------3------11-------------------1-------------------------------------------------------------------------------------------1---1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-- ------11-------111-11123331------21--111111---223332231-211111---------------------------2211111------------G11--------------------------------------------------------------3-22-1A------1221113321125 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- DISOP:02AL 1-6, 28-31, 212-225, 271-311, 434-445, 573-579, 605-606, 608-613| PSIPRED cccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccccccEEEcccEEEcccccHHHHHHHHHHHHHHccccccHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEccccccHHHHHHHHHHHHHHccccccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEHHHHHccccccccHHHHHHHHHHHHHHccccccEEEEEEEccccHHHHHHHccccccccccEEEcccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHccHHHHHHHHHHHHHHccccccccc //