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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55672.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  10/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:493 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   71->489 PF04600 * DUF571 7e-19 26.3 %
:HMM:PFM   59->490 PF04600 * DUF571 7.2e-106 37.7 406/425  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55672.1 GT:GENE BAD55672.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 915789..917270 GB:FROM 915789 GB:TO 917270 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55672.1 LENGTH 493 SQ:AASEQ MTESLSSGAVAAEPELCRVSVIGGNTQVDVGLPATVPIATFMRDLVALIESRNPDPVDSEEGAAPLETQHWTLARLGRDAIPPSRTLTEAEVYDGELLVLRSVTAKESPALFDDVIDAVSRLTAEDHHSWSPRSARWTGLAACVTVVLLALGLFAVGRGHGGGLAAPFLATGAGLAAVAAAVIAVRKYDDRLTALWLSLTALLLFFGGAALFVPGELGSPHLMLGCSVSLVIAVGLYRATGVGATLCAAAVTLALFGGVAALVRMVWDTPLPRIAVGLLVGAIILLSMIPRLAAVAARLPVPPVPTAGAAIDPADHEQRPTIEGIGAIGATALPSAVGLGERARAANQYQTGMVIGAAVVAAVGALGTADPLGHVRWQGLTLAVITAIILCLRGRAFADLVQAGTLIVAGASVIAGLLTALAFGDSGLWLLSGGLLLALAAAVVAFGVIGPHIEITPVTRRAGEIFEYLLICAIIPLALWLLGIYSMARNLNL GT:EXON 1|1-493:0| TM:NTM 11 TM:REGION 138->157| TM:REGION 164->185| TM:REGION 191->213| TM:REGION 217->239| TM:REGION 243->265| TM:REGION 275->297| TM:REGION 348->370| TM:REGION 372->393| TM:REGION 401->423| TM:REGION 429->451| TM:REGION 465->487| SEG 138->157|tglaacvtvvllalglfavg| SEG 169->185|latgaglaavaaaviav| SEG 192->211|ltalwlsltalllffggaal| SEG 239->255|atgvgatlcaaavtlal| SEG 290->305|prlaavaarlpvppvp| SEG 352->369|gmvigaavvaavgalgta| SEG 427->450|glwllsgglllalaaavvafgvig| RP:PFM:NREP 1 RP:PFM:REP 71->489|PF04600|7e-19|26.3|403/427|DUF571| HM:PFM:NREP 1 HM:PFM:REP 59->490|PF04600|7.2e-106|37.7|406/425|DUF571| OP:NHOMO 13 OP:NHOMOORG 10 OP:PATTERN -------------------------------------------------------------------- ----2---------1---------1------1----2--1-1----------------------112-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-6, 55-64| PSIPRED cccccccccccccccEEEEEEEcccEEEEEEccccccHHHHHHHHHHHHHHHccccccccccccccccEEEEEEEcccccccHHccccccccccccEEEEEEccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //