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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55673.1
DDBJ      :             putative protease
Swiss-Prot:             

Homologs  Archaea  12/68 : Bacteria  180/915 : Eukaryota  18/199 : Viruses  0/175   --->[See Alignment]
c.41.1
:480 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   91->390 1dbiA PDBj 4e-22 39.1 %
:RPS:PDB   86->400 1cseE PDBj 4e-32 34.4 %
:RPS:SCOP  80->399 1a2qA  c.41.1.1 * 4e-29 33.3 %
:HMM:SCOP  74->402 1v6cA_ c.41.1.1 * 3e-58 37.0 %
:RPS:PFM   97->370 PF00082 * Peptidase_S8 3e-12 39.6 %
:HMM:PFM   86->373 PF00082 * Peptidase_S8 7.1e-36 36.5 244/307  
:BLT:SWISS 91->390 THES_BACSJ 8e-23 38.5 %
:PROS 102->112|PS00136|SUBTILASE_ASP
:PROS 137->147|PS00137|SUBTILASE_HIS
:PROS 343->353|PS00138|SUBTILASE_SER
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55673.1 GT:GENE BAD55673.1 GT:PRODUCT putative protease GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 917267..918709 GB:FROM 917267 GB:TO 918709 GB:DIRECTION + GB:PRODUCT putative protease GB:PROTEIN_ID BAD55673.1 LENGTH 480 SQ:AASEQ MNRRLGLRRGAGTVGAAVVLGAAVFALPASAAAIGPPVVDDGALGAALAISGRPAPLEPTEQRSVCAEPILTGAPPVEPPLAQAVLDLPTAWQFSRGAGQKVAVIDTGVNRHPRLRALQAGGDYVADTDGTVDCDGHGTLVAGIIAAAPSPDDAFAGVAPDAEILAIRQLSLAYEPKDRRSGEQSGAITTSGYGNVLTLAGAVVRAVDMGATVINISEVACSAAGATPEDAALGAAVKYAFDRNVVVVAAAGNLTSEGACKTQNERPGWSSVQTVASPAWFDPYVLSVASIDPNGMVSELSLHGPWVRAAAIGRRIVSLDSKPGATGLVDGVQTSEGISPIEGTSFAAPYVSGLVALVRARFPELNAAQVIDRVVRTAHAPGTGRDDKLGHGLIDPVAALTAELPDQPVHAGADTPRPLAEPARPPGPDPLPRRVAVIGSITSLAVLGVGAALSIPFRNRRELDLDHLDREVLDREVTEG GT:EXON 1|1-480:0| BL:SWS:NREP 1 BL:SWS:REP 91->390|THES_BACSJ|8e-23|38.5|244/401| PROS 102->112|PS00136|SUBTILASE_ASP|PDOC00125| PROS 137->147|PS00137|SUBTILASE_HIS|PDOC00125| PROS 343->353|PS00138|SUBTILASE_SER|PDOC00125| TM:NTM 2 TM:REGION 13->35| TM:REGION 199->221| SEG 3->33|rrlglrrgagtvgaavvlgaavfalpasaaa| SEG 416->434|prplaeparppgpdplprr| BL:PDB:NREP 1 BL:PDB:REP 91->390|1dbiA|4e-22|39.1|235/271| RP:PDB:NREP 1 RP:PDB:REP 86->400|1cseE|4e-32|34.4|262/274| RP:PFM:NREP 1 RP:PFM:REP 97->370|PF00082|3e-12|39.6|240/285|Peptidase_S8| HM:PFM:NREP 1 HM:PFM:REP 86->373|PF00082|7.1e-36|36.5|244/307|Peptidase_S8| GO:PFM:NREP 2 GO:PFM GO:0004252|"GO:serine-type endopeptidase activity"|PF00082|IPR000209| GO:PFM GO:0006508|"GO:proteolysis"|PF00082|IPR000209| RP:SCP:NREP 1 RP:SCP:REP 80->399|1a2qA|4e-29|33.3|267/275|c.41.1.1| HM:SCP:REP 74->402|1v6cA_|3e-58|37.0|284/0|c.41.1.1|1/1|Subtilisin-like| OP:NHOMO 399 OP:NHOMOORG 210 OP:PATTERN 11--------------1-11---1---1--1----------------2-------1--22-------- ----311111111-24455-543343545553343521-11111-----1111111-1--54-16224351-----------1----------------------1--1-----------------------112-11123-1-4-121-11111----1---11-14332----1-------81211----232222222213223323733332313111331------32------------------------------------------------------------------------------------------31--2-----------111---------11-1---11--12-11---1--1-11----------1--1----------------------------1------------------1---------------------------------------------------------------------------------------------1-------------------1--------------22--4-1------------1-1-31-------3---------------------------------12-1--1-------------------1-------------------------------------------------------------------------------------------------------------2-1-----------------------------------------------------------------------1-1111222-1-1----------------------------------------------2-121-------- ---1-----------1---------------------------------------11------1---1----11------1---1-----------------------21-----------------------------------------------------1-------------------211------11----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 342 STR:RPRED 71.2 SQ:SECSTR #################################################################ccccccccccccccHHHHHHHTHHHHHHHTccTTcEEEEEEccccTTcTTccEEEEEEccTTccTTcccccHHHHHHHHHHcccccccccccccTTcEEEEEEcccTHHHccHHHHHHHHHHHcTTccccHHHHHHHHHHHHHTTccEEEEcEEEEEEcccccccHHHHHHHHHHHHHTcEEEEEcccccccTTcccccTcccccTccccccTTTcTTTcEEEEEEcTTccccTTccccTTccEEEEcccEEEEETTTEEEEEEccEETTTEEEEEccHHHHHHHHHHHHHHHHHHcTTccHHHHHHHHHHTccccccHHHHHHTTccccHHHHTTTHHccc######################################################################### DISOP:02AL 1-6, 38-46, 419-426, 479-480| PSIPRED cccccccHHHHHHHHHHHHHHHHHHHccccccccccHHccccccccccccccccccccccccccccccccccccccccccccHHHccccHHHcccccccEEEEEEEcccccccccccccccccccccccccccccccccEEEEEEEccccccccEEEEccccEEEEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEccccccccccccccHHHHHHHHHHHHccEEEEEEccccccccccccccccccccccccccccccccccEEEEEEEcccccccccccccccEEEEcccccEEEcccccccccEEccccccccEEEEcccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccccccccccccEEcHHHHccccccccccccccccccccccccccccccccccEEEEEEcccccHHcccEEEEEEccccccEEEHHHHHHHHHHHccccc //