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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55674.1
DDBJ      :             putative FtsK/SpoIIIE family protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  468/915 : Eukaryota  0/199 : Viruses  1/175   --->[See Alignment]
c.37.1d.74.3
:1351 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   443->696 2iutA PDBj 2e-12 30.0 %
:BLT:PDB   848->1032 2iutA PDBj 6e-04 24.6 %
:BLT:PDB   1136->1332 2iutA PDBj 1e-06 23.2 %
:RPS:PDB   398->538 1e9sE PDBj 2e-04 18.0 %
:RPS:SCOP  123->279 1w36B2  c.37.1.19 * 1e-04 10.9 %
:RPS:SCOP  486->577 1xppA  d.74.3.2 * 2e-04 10.2 %
:HMM:SCOP  420->667 1e9rA_ c.37.1.11 * 7.8e-30 28.2 %
:HMM:SCOP  780->1046 1e9rA_ c.37.1.11 * 2.2e-23 19.3 %
:HMM:SCOP  1084->1280 1e9rA_ c.37.1.11 * 2.3e-05 21.3 %
:RPS:PFM   446->632 PF01580 * FtsK_SpoIIIE 8e-21 38.3 %
:RPS:PFM   848->1006 PF01580 * FtsK_SpoIIIE 2e-10 26.4 %
:RPS:PFM   1136->1280 PF01580 * FtsK_SpoIIIE 5e-09 26.9 %
:HMM:PFM   444->633 PF01580 * FtsK_SpoIIIE 2.4e-39 40.0 180/205  
:HMM:PFM   816->1066 PF01580 * FtsK_SpoIIIE 3.2e-48 35.4 181/205  
:HMM:PFM   1122->1237 PF01580 * FtsK_SpoIIIE 4e-10 23.9 113/205  
:BLT:SWISS 99->1026 ESSC_STAAR 1e-63 24.9 %
:BLT:SWISS 1121->1349 FTSK_HELPJ 7e-07 21.8 %
:TM
:REPEAT 2|423->678|783->1050
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55674.1 GT:GENE BAD55674.1 GT:PRODUCT putative FtsK/SpoIIIE family protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 918713..922768 GB:FROM 918713 GB:TO 922768 GB:DIRECTION + GB:PRODUCT putative FtsK/SpoIIIE family protein GB:PROTEIN_ID BAD55674.1 LENGTH 1351 SQ:AASEQ MVTEGFVRRPRIAPPRAPGGEVALNPPPEIPRPLPAPLLMKLMPVVMVIAVVGMIAMMAMMGRNLLANPMAMMFPMMMIMSMVGMMMGYRGGTSKTAAELNEERKDYFRYLDQMRKDVRRTGKKQLESLLWSHPEPRDLVSVIGTRRMWERRPNDPDFGHVRVGVGSHRLATKLARPETGPLEDLEPVSTVALRRFVRTHSVVHQLPTAVSLRAFPAVNIGGDPDQARTLVRSMLMELTAFHGPDHVAIAVVCADPDAPTWAWLKWLPHLQHPTARDGMGSARMMYGSLGELETALNDELLERGRFMRNPQPTQGRLHLVVVIDDGYVNGTERLISESGLDAVTVLDLNAPENGLAARRGLQLVVEDGDVSAKSAAGVEKFAVADEVSIAESEAFGRGLARYRIATAAQIVSLGDETRADPGLMALLKIPDAAQIDPAKVWRPRTARERLRVPIGVTPDGTPVEIDIKESAENGMGPHGLCIGATGSGKSEFLRTLVLSLVTTHSPDYLNLVLVDFKGGATFLGLEPLPHVAAVITNLEEELSMVDRMKDALAGEMNRRQELLRAAGNFANVTDYEKARAAGAPLDPLPALFVVVDEFSELLSQKPDFADLFVMIGRLGRSLHVHLLLASQRLEENKLRGLDSHLSYRIGLRTFSANESRAVLGITDAYHLPSVPGSGYLKSDADDPLRFNATYVSGPYVSPSGTSEVDGRTVGGQSPTLFTAAPVEITAPSEPASAVRSGLPELPPPPPAAPTQEEGLPDTLLEVVVKRLTGHGRPAHEVWLPPLDESPSVDMLLPEPDWRSPVNRHGQLWLPIGIIDKPYEQRRDVLTVHLAGAAGNVAVVGGPQSGKSTTVRTIVMAAAATHTPEQVQFYCLDFGGGSLAGLSGIPHVGSVAGRLDSDRVRRTVAELTTLMRQREERFTELGIESMAEFRRRKFAGLEARMINGTAADPARDPLAADQFGDVFLVIDGWAAMREEFDVLEPQINAIAVQGLSYGIHLIMTASRWGEIRPVIKDQIGTRLELRLGDPTDSEMGRRTAALVPMGRPGRGLTPEQLHMLIALPRLDSSSDAATVADGVAQAKQDLVQMYGSRRAPEVRMLPLEISRENVLAIAADHDVKPSPTKVVVGLGENELAPWVIDFETEPHFMAFADVECGKTTLLRNIVMGVVENSTPQEAKVILIDYRRTMLGLVEGDHLAGYSTSSQTSGKMLNGLAKYMSQRIPGSDITPQQLRERSWWTGPEIYLVVDDYDMVATGVNPLLPLVEYLPQARDIGLHLIVARRIGGASRALFDGVLGTMKNMSVDTLIMSGPRDEGKLLGDVRPTKLPPGRGVLVSRSRGQEMVQIAHLPPL GT:EXON 1|1-1351:0| BL:SWS:NREP 2 BL:SWS:REP 99->1026|ESSC_STAAR|1e-63|24.9|862/1482| BL:SWS:REP 1121->1349|FTSK_HELPJ|7e-07|21.8|224/844| TM:NTM 2 TM:REGION 36->58| TM:REGION 68->90| NREPEAT 1 REPEAT 2|423->678|783->1050| SEG 8->18|rrpriapprap| SEG 24->62|lnpppeiprplpapllmklmpvvmviavvgmiammammg| SEG 70->92|mammfpmmmimsmvgmmmgyrgg| SEG 578->591|araagapldplpal| SEG 742->753|lpelpppppaap| SEG 834->845|agaagnvavvgg| SEG 949->960|aadpardplaad| BL:PDB:NREP 3 BL:PDB:REP 443->696|2iutA|2e-12|30.0|243/408| BL:PDB:REP 848->1032|2iutA|6e-04|24.6|181/408| BL:PDB:REP 1136->1332|2iutA|1e-06|23.2|197/408| RP:PDB:NREP 1 RP:PDB:REP 398->538|1e9sE|2e-04|18.0|111/425| RP:PFM:NREP 3 RP:PFM:REP 446->632|PF01580|8e-21|38.3|175/186|FtsK_SpoIIIE| RP:PFM:REP 848->1006|PF01580|2e-10|26.4|141/186|FtsK_SpoIIIE| RP:PFM:REP 1136->1280|PF01580|5e-09|26.9|142/186|FtsK_SpoIIIE| HM:PFM:NREP 3 HM:PFM:REP 444->633|PF01580|2.4e-39|40.0|180/205|FtsK_SpoIIIE| HM:PFM:REP 816->1066|PF01580|3.2e-48|35.4|181/205|FtsK_SpoIIIE| HM:PFM:REP 1122->1237|PF01580|4e-10|23.9|113/205|FtsK_SpoIIIE| GO:PFM:NREP 21 GO:PFM GO:0000166|"GO:nucleotide binding"|PF01580|IPR002543| GO:PFM GO:0003677|"GO:DNA binding"|PF01580|IPR002543| GO:PFM GO:0005524|"GO:ATP binding"|PF01580|IPR002543| GO:PFM GO:0007049|"GO:cell cycle"|PF01580|IPR002543| GO:PFM GO:0007059|"GO:chromosome segregation"|PF01580|IPR002543| GO:PFM GO:0016021|"GO:integral to membrane"|PF01580|IPR002543| GO:PFM GO:0051301|"GO:cell division"|PF01580|IPR002543| GO:PFM GO:0000166|"GO:nucleotide binding"|PF01580|IPR002543| GO:PFM GO:0003677|"GO:DNA binding"|PF01580|IPR002543| GO:PFM GO:0005524|"GO:ATP binding"|PF01580|IPR002543| GO:PFM GO:0007049|"GO:cell cycle"|PF01580|IPR002543| GO:PFM GO:0007059|"GO:chromosome segregation"|PF01580|IPR002543| GO:PFM GO:0016021|"GO:integral to membrane"|PF01580|IPR002543| GO:PFM GO:0051301|"GO:cell division"|PF01580|IPR002543| GO:PFM GO:0000166|"GO:nucleotide binding"|PF01580|IPR002543| GO:PFM GO:0003677|"GO:DNA binding"|PF01580|IPR002543| GO:PFM GO:0005524|"GO:ATP binding"|PF01580|IPR002543| GO:PFM GO:0007049|"GO:cell cycle"|PF01580|IPR002543| GO:PFM GO:0007059|"GO:chromosome segregation"|PF01580|IPR002543| GO:PFM GO:0016021|"GO:integral to membrane"|PF01580|IPR002543| GO:PFM GO:0051301|"GO:cell division"|PF01580|IPR002543| RP:SCP:NREP 2 RP:SCP:REP 123->279|1w36B2|1e-04|10.9|147/395|c.37.1.19| RP:SCP:REP 486->577|1xppA|2e-04|10.2|88/99|d.74.3.2| HM:SCP:REP 420->667|1e9rA_|7.8e-30|28.2|220/433|c.37.1.11|1/3|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 780->1046|1e9rA_|2.2e-23|19.3|244/433|c.37.1.11|2/3|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 1084->1280|1e9rA_|2.3e-05|21.3|174/433|c.37.1.11|3/3|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 812 OP:NHOMOORG 470 OP:PATTERN -----------------------------------------------1-------------------- 11--722222222233588-865565877774566733122323332122313332211154213363331222222211-2------111111--1--111111111-11111111111----1-11111111112222211121-11----------------------------------111111111233333332333233323333333352232311333333212333333333333332112211212211111221122-12111111222122221111111111111111111111111121111111111114111111111111111-111-141121111112111111111111---11------------1--------------------------1---------------------------------------------------------11-------------------1--1-------12211112222221222222211-1222--22213-11111-1111-1--111111221211111111211111-11111------------------1111111111111221111111111--------1111------1--1----------1--1-----------11------------------------------------11-1-------------------------1----------------------1111-1----------111--111---------1-------------------111111111----------11---------------------11----11111121111----1--------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------ STR:NPRED 657 STR:RPRED 48.6 SQ:SECSTR #############################################################################################################################################################################################################################################################################################################################################################################################################cTTTcccccccEEEEEccE###############EEHHHHHHHHcccccccEEccEEEEEETTEEccGGGGGc#####GGcEEEEccTTccHHHHHHHHHHHHEEEEEETTHHHHHHccTTcEEEcTTcTTcccccGGGGcHHcHHHHHHHHHHHHHHHHHHHHHHHHHTcHHHccccccTTccccccccccEEEEEEcccTTHHHTcHHHHHHHHHHHHHcTTTTEEEEEEEccccTTTccHHHHTccEEEEEccccHHHHHHHHccccGGGcccTTEEEEEcTTccccEEEEEcccc#######################################################################################################################################################ccHHHHHHHHHHHHHTTccTTTEEEEEEccccHHHHTTTTcTTcccccHHHHHHHHHHHHHH####HHHHHHHHHHHTcccHHHHHHHHHHHHTTcccccTTcccccTTcccccccEEEEEEcccTTHHHHTHHHHHHHHHHHHHcTTTTEEEEEEEccTTTccHHHHHTccEEEEEccccHHHH#######################################################################################################EEEEEGGGcccEEEEccTTccHHHHHHHHHHHHHTTccTTTEEEEEEccccHHHHTTTTTccccccccHHHHHHHHHHHHHHHHHHHTTcccccTTccccccccccEEEEEEcccTHHHHTcHHHHHHHHHHHHcTTTTEEEEEEEcccHHHHHTccEEEEEccccHHHHHHHHccccGGGcccTTEEEEEcTTccc################### DISOP:02AL 23-39, 89-102, 175-182, 293-315, 739-753, 1317-1320| PSIPRED ccccEEEEcccccccccccccccccccccccccccccHHHHHcccHHHHHEEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHccccEEEEEccccccEEEEEEcccccccccEEcccccccccHHHHHHHHHHHHHHHHHHccccccEEEEcccccEEEEEccHHHHHHHHHHHHHHHHHcccccEEEEEEEEccccccccHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEcccccccHHHHHccccccEEEEEEEccccccHHHHHccccccccEEEEEEEcccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEcccccccccHHHHHccccccccEEEEEEEcccccEEEEEHHHHccccccccEEEEccccccHHHHHHHHHHHHHHHccccEEEEEEEEcccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHccccccccccEEEEHHHHHHHHHcccHHHHHHHHHHHHHccccEEEEEEEcccccccccHHHHHcccEEEEEEccHHHHHHHcccccHHHccccccEEEEEcccccEEEEEEEEEccccccHHHHHHHHHHHcccccccccHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHcHHccccccccccEEEEEEEEEcccccccccEEEEEccccccEEEEccccccHHHHHHHHHHHHHHHccccEEEEEEEEcccccHHHcccccHHccEEccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccccccccccccccccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccHHHHHccccEEEEEEccHHHHHcccccccccccccccccccccccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccEEcHHHHHHHHHHccccccccEEEEEEEcccccEEEEEEcccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHcccccccEEEEEEccHHHHHccHHHHHHHHHHHHHcccccEEEEEEccccccHHccHHHHHHHHHHccccEEEEcccHHHHHEEcccccccccccEEEEEEccccccEEEEEEcccc //