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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55688.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  14/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.39.1
:316 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  42->142 1s7bA_ f.39.1.1 * 1.8e-09 30.9 %
:HMM:SCOP  197->304 1s7bA_ f.39.1.1 * 1.3e-08 29.5 %
:HMM:PFM   18->142 PF00892 * EamA 5.9e-18 24.4 123/126  
:HMM:PFM   165->295 PF00892 * EamA 6.2e-12 28.7 122/126  
:BLT:SWISS 253->294 AMCL3_HUMAN 7e-04 45.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55688.1 GT:GENE BAD55688.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(934708..935658) GB:FROM 934708 GB:TO 935658 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55688.1 LENGTH 316 SQ:AASEQ MVSRARAGVWLTVASGLAFASSGPLAKSVLAAGWSPGAVLAVRLTGAAAVMLVAAALADPRGLARSPRHLRTIGGFGVVAVAGVQATFFLSLQHLQVGVALMIQFLAPVVVIAWDWVVRGRRPTPLTLLGAAVALGGAALVIDVFHTEGLRPVGLAWAALSMLCNAAFFLLSARTSDSLAPVTLLGAGLGVAAVTSWALGLSSVLPLHFGTGTAVLAARELPVWAALALLITISTVVAYACGVAGAARIGSTLMSLVLLSEVLFAVALSRILLGEAIAPIQMVGALLVVGGIALARSGGQRRPAASEVPAPGPQAT GT:EXON 1|1-316:0| BL:SWS:NREP 1 BL:SWS:REP 253->294|AMCL3_HUMAN|7e-04|45.2|42/338| TM:NTM 9 TM:REGION 8->30| TM:REGION 39->61| TM:REGION 70->92| TM:REGION 97->119| TM:REGION 124->146| TM:REGION 152->174| TM:REGION 182->204| TM:REGION 218->240| TM:REGION 264->286| SEG 47->58|aaavmlvaaala| SEG 74->89|ggfgvvavagvqatff| SEG 123->141|ptpltllgaavalggaalv| SEG 236->247|vvayacgvagaa| HM:PFM:NREP 2 HM:PFM:REP 18->142|PF00892|5.9e-18|24.4|123/126|EamA| HM:PFM:REP 165->295|PF00892|6.2e-12|28.7|122/126|EamA| HM:SCP:REP 42->142|1s7bA_|1.8e-09|30.9|97/106|f.39.1.1|1/2|Multidrug resistance efflux transporter EmrE| HM:SCP:REP 197->304|1s7bA_|1.3e-08|29.5|105/106|f.39.1.1|2/2|Multidrug resistance efflux transporter EmrE| OP:NHOMO 14 OP:NHOMOORG 14 OP:PATTERN -------------------------------------------------------------------- ----1---------1------1---1------111111--------------111------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-3, 296-316| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccccccccccccc //