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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55689.1
DDBJ      :             putative methylthioadenosine phosphorylase
Swiss-Prot:             

Homologs  Archaea  61/68 : Bacteria  310/915 : Eukaryota  161/199 : Viruses  0/175   --->[See Alignment]
c.56.2
:269 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->211 1v4nC PDBj 4e-51 48.5 %
:RPS:PDB   6->247 3e9zC PDBj 6e-58 23.8 %
:RPS:SCOP  7->253 1cb0A  c.56.2.1 * 8e-67 36.8 %
:HMM:SCOP  6->264 1cb0A_ c.56.2.1 * 1.2e-75 39.4 %
:RPS:PFM   77->196 PF01048 * PNP_UDP_1 5e-06 36.7 %
:HMM:PFM   9->228 PF01048 * PNP_UDP_1 2.8e-38 24.0 208/234  
:BLT:SWISS 15->253 Y123_PYRAB 1e-50 46.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55689.1 GT:GENE BAD55689.1 GT:PRODUCT putative methylthioadenosine phosphorylase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 935791..936600 GB:FROM 935791 GB:TO 936600 GB:DIRECTION + GB:PRODUCT putative methylthioadenosine phosphorylase GB:PROTEIN_ID BAD55689.1 LENGTH 269 SQ:AASEQ MSALPRPALAVIGGTGFYDFFDTATQDVEIDTPYGAPSAPIAVGEVAGRPVAFVPRHGKRHEYAPHTLPYLANMWALRSLGVRRIFAPCAVGSLRADWGPGTVAVPEQLVDRTSGRPQTYFDGGGVHVSFADPYCDELRGAAIGSAVEELPMQPGGTMVVVQGPRFSTRAESRWFAGQGWDLVNMTGYPEAVLARELEMCYCAVALVTDLDAGLESGEGVHAVDVFAEFKRNIEPFKELIRGAISAVEGTDTCARCRVHEGVTLPFDLP GT:EXON 1|1-269:0| BL:SWS:NREP 1 BL:SWS:REP 15->253|Y123_PYRAB|1e-50|46.8|235/257| BL:PDB:NREP 1 BL:PDB:REP 6->211|1v4nC|4e-51|48.5|206/267| RP:PDB:NREP 1 RP:PDB:REP 6->247|3e9zC|6e-58|23.8|240/283| RP:PFM:NREP 1 RP:PFM:REP 77->196|PF01048|5e-06|36.7|120/229|PNP_UDP_1| HM:PFM:NREP 1 HM:PFM:REP 9->228|PF01048|2.8e-38|24.0|208/234|PNP_UDP_1| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF01048|IPR000845| GO:PFM GO:0009116|"GO:nucleoside metabolic process"|PF01048|IPR000845| RP:SCP:NREP 1 RP:SCP:REP 7->253|1cb0A|8e-67|36.8|242/268|c.56.2.1| HM:SCP:REP 6->264|1cb0A_|1.2e-75|39.4|259/0|c.56.2.1|1/1|Purine and uridine phosphorylases| OP:NHOMO 621 OP:NHOMOORG 532 OP:PATTERN 111111111111111111111111----1-1-111111111111111111111122222221111-11 221-----------21122-4---1122222112121-221--1-1-1-11------211121----1211--------11--11111----------------1----1--------------------------11121111111112111--1111111111111111111111111111-----11-1-----------------------------------------------------------------------------------------------------------------------------------2-----------1-1----------1--4--21111121--1111121--11----------11111---11111------------221222112-1--111------1---11111-111111111111111111111-1------------------------------1-1-------------1------------------1---------------1----1111121-------111111--11-----12----1111111112212211--------------------------11----11---------------------------1111------1----1-1--11111-----11111-11-1---1--1----1---1-1-1111111111-1-----------1-1111-1111----11111----111------------------------11-1-1111--1-1----1111111111111---------------11111111111111--1-111111---------------------------------------------1-1- -1----1-211-111111111111111111111111-111111111-11111111111111111111111111-11111111111111-21111111111221111-1-12-412111111111121214D1-21311113112111111211111111112121-121211111--------------1------2-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 261 STR:RPRED 97.0 SQ:SECSTR HHHHccccEEEEcccccTTHHHHcEEEEEEEcccTTcccEEEEEEETTEEEEEEEEEccccGGGTccHHHHHHHHHHHHHTccEEEEEEEEEEccTTccTTcEEEEEEEEEHHHHTTTcTTcccccccccTTcccHHHHHHHHHHHHHcGGGEEEEEEEEccccccccHHHHHHHHHTTccEEEcccHHHHHHHHHTTcEEEEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccGGHHHH######## DISOP:02AL 1-4, 266-268| PSIPRED ccccccccEEEEEcccHHHHHHcccccEEEEccccccccEEEEEEEccEEEEEEEEcccccccccccccccHHHHHHHHHcccEEEEEccccccccccccccEEEEHHHHccccccccccccccEEcccccccccHHHHHHHHHHHHHccEEEcccEEEEEcccccccHHHHHHHHHHcccEEcccccHHHHHHHHccccEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHccccccccc //