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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55691.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  12/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:548 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   180->262 PF11203 * DUF2984 7e-04 34.9 %
:HMM:PFM   179->276 PF11203 * DUF2984 4.7e-27 35.1 97/98  
:HMM:PFM   20->70 PF04403 * PqiA 0.00014 23.5 51/160  
:BLT:SWISS 280->417 R1A_CVBLU 2e-04 35.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55691.1 GT:GENE BAD55691.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(937197..938843) GB:FROM 937197 GB:TO 938843 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55691.1 LENGTH 548 SQ:AASEQ MAEATGAGPRPLFGRISMPNLLAAQVIGLLAGIVALLAGLDAVVALAVAVVAMLLPLIPVAKRTVLDWIVTWWRFRTRREYELGDTVDFRGPDDRSLGLYWDGSRVVTVVEVLPPRGGLTRISSSTVLASHLLPLPELAKCLNQHDILLSGIDIISHGHRSRAGTPAGKIYETLLGPLPATAHRSVWLAISFDAVACPGAAERRGGGTEGASRAVTIATQRIMRALEDADCNARILTAPEIRKAVLQITAGYDPRALTHRWRYAELGNAVNIGSAVDPDHLGSDLLAQLWVAPSRGTTVTVRLRPGSSAETVNIGASWRLTARELPERAKQTGMISMNGRHREGLLANLPLAVPNVDDTVPMTEYPIDVVGALHLPSSGCGQLIGSDENNQGVAVRIIGQGISTVYVAGELYLAQQLVFRALAVGERILIRTDRPHAWEHLVQTIGNPERLTIAVETHQSDAGYTAAVVDGVLAPAPHAGVTTIYVTGDPMGWPATRPDLSIHQPGAIGNRVIVRTGTTQVDLTLVSIAKEATYIGHPRGRRPMAAAQ GT:EXON 1|1-548:0| BL:SWS:NREP 1 BL:SWS:REP 280->417|R1A_CVBLU|2e-04|35.0|120/4383| TM:NTM 1 TM:REGION 28->50| SEG 26->61|vigllagivallagldavvalavavvamllplipva| SEG 199->214|gaaerrgggtegasra| RP:PFM:NREP 1 RP:PFM:REP 180->262|PF11203|7e-04|34.9|83/97|DUF2984| HM:PFM:NREP 2 HM:PFM:REP 179->276|PF11203|4.7e-27|35.1|97/98|DUF2984| HM:PFM:REP 20->70|PF04403|0.00014|23.5|51/160|PqiA| OP:NHOMO 13 OP:NHOMOORG 12 OP:PATTERN -------------------------------------------------------------------- --------------111-----111------1----2111------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-7, 542-548| PSIPRED ccccccccccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEEccccccccHHEEcccccccEEEEEEcccEEEEEEEEcccccccEEEEEEEccccccccHHHHHHHHcccccccccEEEEEEEEEccccccccccHHHHHcccccccEEEEEEEEEEcHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccEEccHHHHHHHHHHHHccccccccccccEEEEEcccEEEEEEEccccccccHHHHHHccccccEEEEEEEEcccccccEEEEEEEEEEcccccccccccccccccHHHHHHHHHcccccccccccccccccHHHHHHccEEcccccccEEEEEEEcccEEEEEEcccccEEEEEEEcccEEEEEEEEEEccccEEEEEcccHHHHHHHHHHHcccccEEEEEEcccccccEEEEEEEEEccccccccEEEEEEcccccccccccccEEEEcccccccEEEEEEccEEEEEEEEEcHHHHHHcccccccccccccc //