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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55693.1
DDBJ      :             putative ion transporter
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  139/915 : Eukaryota  53/199 : Viruses  0/175   --->[See Alignment]
f.14.1
:264 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   128->203 1orqC PDBj 1e-15 43.4 %
:RPS:PDB   152->180 2a9hA PDBj 7e-14 72.4 %
:RPS:SCOP  125->203 1orqC  f.14.1.1 * 3e-21 41.8 %
:HMM:SCOP  5->210 1orqC_ f.14.1.1 * 2.5e-31 32.5 %
:RPS:PFM   130->200 PF07885 * Ion_trans_2 2e-10 43.7 %
:HMM:PFM   129->206 PF07885 * Ion_trans_2 2.4e-18 35.1 74/79  
:HMM:PFM   175->239 PF06305 * DUF1049 0.00019 20.8 53/80  
:BLT:SWISS 128->203 KVAP_AERPE 4e-15 43.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55693.1 GT:GENE BAD55693.1 GT:PRODUCT putative ion transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(940447..941241) GB:FROM 940447 GB:TO 941241 GB:DIRECTION - GB:PRODUCT putative ion transporter GB:PROTEIN_ID BAD55693.1 LENGTH 264 SQ:AASEQ MTESPELTRRQAWERATNVPMLVLAVVFIAVYAWHVLDTGASPRLDAWLTWIDVVIWASFAADFLIRAYLSTDRLRFVRTHPLDLLIVVVPPFRPLRLLRAALLLLGTFQRSSITRPRLAVFVGASSVLILLLGSLAFFDAEYGASDSKIDSYGDALWWAAVTVTTVGYGDIYPVTAEGRLVSLILMTFGIGLISFAIGTATSWVMDQLKTVEASQERTDREIGGLLVELKELRAEVAALRDARSSPGAGNNGAVDPPGALDRA GT:EXON 1|1-264:0| BL:SWS:NREP 1 BL:SWS:REP 128->203|KVAP_AERPE|4e-15|43.4|76/295| TM:NTM 5 TM:REGION 15->37| TM:REGION 49->71| TM:REGION 119->141| TM:REGION 153->175| TM:REGION 181->203| SEG 85->106|llivvvppfrplrllraallll| BL:PDB:NREP 1 BL:PDB:REP 128->203|1orqC|1e-15|43.4|76/223| RP:PDB:NREP 1 RP:PDB:REP 152->180|2a9hA|7e-14|72.4|29/97| RP:PFM:NREP 1 RP:PFM:REP 130->200|PF07885|2e-10|43.7|71/81|Ion_trans_2| HM:PFM:NREP 2 HM:PFM:REP 129->206|PF07885|2.4e-18|35.1|74/79|Ion_trans_2| HM:PFM:REP 175->239|PF06305|0.00019|20.8|53/80|DUF1049| RP:SCP:NREP 1 RP:SCP:REP 125->203|1orqC|3e-21|41.8|79/223|f.14.1.1| HM:SCP:REP 5->210|1orqC_|2.5e-31|32.5|200/223|f.14.1.1|1/1|Voltage-gated potassium channels| OP:NHOMO 346 OP:NHOMOORG 200 OP:PATTERN 11---------------1----------1------------------11-1------------1---- ---------------------1--1------1111111---------------1------11-----121-1111-11--1----1-----2--11----1-1-21----------------------------2--11-------1-1------2211-1-1-------1-1-------1--1------------1-11-11111111-1----111-------1111111---------------------1----1----1------1-1---1---------111----1111-1-------------------------1-1---------------1---------1-1------------------1-------------121-----1---------------------------------------1----1---------------------1---------------------------------------------12---------------------------------------------------------------1---1---1-----------------1--------------------------11--11-1------11------1----1--------------------1----------------------------------1------------------------1--------------------------------------1---------------11111-1111---------------1---1----------112111111-111----------------1-----------------------------------------------------1-2 ------1-----------------------------------------------------------------------------------------------------1-7-24335-2-212-C6-12GQ6-528121-21322-222-61-5-21222447-11-4----13-----31-1------------1--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 79 STR:RPRED 29.9 SQ:SECSTR ############################################################################################################################cccHHHHHHHHHHHHHTTcccTTcccccHHHHHHHHHHHHTTccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH############################################################# DISOP:02AL 1-5, 215-264| PSIPRED cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccccccccccccccccccc //