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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55694.1
DDBJ      :             putative protease
Swiss-Prot:             

Homologs  Archaea  7/68 : Bacteria  168/915 : Eukaryota  18/199 : Viruses  0/175   --->[See Alignment]
c.41.1
:455 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   71->386 1dbiA PDBj 8e-22 39.6 %
:RPS:PDB   58->385 1a1yE PDBj 6e-26 35.2 %
:RPS:SCOP  58->384 1a2qA  c.41.1.1 * 2e-29 32.2 %
:HMM:SCOP  57->387 1v6cA_ c.41.1.1 * 1.5e-64 38.5 %
:RPS:PFM   77->350 PF00082 * Peptidase_S8 2e-11 38.5 %
:HMM:PFM   63->359 PF00082 * Peptidase_S8 4.9e-39 37.4 235/307  
:BLT:SWISS 71->386 THES_BACSJ 3e-23 39.8 %
:PROS 82->92|PS00136|SUBTILASE_ASP
:PROS 118->128|PS00137|SUBTILASE_HIS
:PROS 328->338|PS00138|SUBTILASE_SER
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55694.1 GT:GENE BAD55694.1 GT:PRODUCT putative protease GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(941336..942703) GB:FROM 941336 GB:TO 942703 GB:DIRECTION - GB:PRODUCT putative protease GB:PROTEIN_ID BAD55694.1 LENGTH 455 SQ:AASEQ MSASFGIGANAGVAHADRPPAVNPGLKPPGDPAAPPEKTERPANSACADILTGGDGPTIPEAQRALDLERAWKFSKGAGQRVAVIDTGVARHPRLPGLEAGGDFVANSGDGTEDCDGHGTLVAGIIAASQVEGQGFAGVAPEAQIITIRQTSKMYQKEGRSAEKAPDEFPDSYGNLNTMASAIVRAADLGATVINISEVWCGTGSPDADNKVGAALHYAAIEKDVVVVVAAGNKDDKCKGENQVIDPLDPTADPWSKVTYNISPARWDDYVLSVGSIDANGAPSSFTIPGPWLGVAASGENMVSLDPRGTGTAIGVVDQRGQQGAVSGTSFATPIVAGVAALVRARFPELSALEVIKRIQATAHAPAEGWNPYIGYGAVDPIAALTNAVPGELPPKRPTPAKSRQLAVPAPPPPPNNTPRNVALIGSGVIAGALVLGYLASFPIRRRFGVSGDDM GT:EXON 1|1-455:0| BL:SWS:NREP 1 BL:SWS:REP 71->386|THES_BACSJ|3e-23|39.8|254/401| PROS 82->92|PS00136|SUBTILASE_ASP|PDOC00125| PROS 118->128|PS00137|SUBTILASE_HIS|PDOC00125| PROS 328->338|PS00138|SUBTILASE_SER|PDOC00125| SEG 407->423|avpapppppnntprnva| BL:PDB:NREP 1 BL:PDB:REP 71->386|1dbiA|8e-22|39.6|245/271| RP:PDB:NREP 1 RP:PDB:REP 58->385|1a1yE|6e-26|35.2|270/274| RP:PFM:NREP 1 RP:PFM:REP 77->350|PF00082|2e-11|38.5|239/285|Peptidase_S8| HM:PFM:NREP 1 HM:PFM:REP 63->359|PF00082|4.9e-39|37.4|235/307|Peptidase_S8| GO:PFM:NREP 2 GO:PFM GO:0004252|"GO:serine-type endopeptidase activity"|PF00082|IPR000209| GO:PFM GO:0006508|"GO:proteolysis"|PF00082|IPR000209| RP:SCP:NREP 1 RP:SCP:REP 58->384|1a2qA|2e-29|32.2|270/275|c.41.1.1| HM:SCP:REP 57->387|1v6cA_|1.5e-64|38.5|283/0|c.41.1.1|1/1|Subtilisin-like| OP:NHOMO 347 OP:NHOMOORG 193 OP:PATTERN ------------------11-1-1-----------------------2-------1---1-------- ----211111111-24455-543343545553343521-1-111-1---111111111--44-14223351-----------------111---------111211---1-----------------------11-11122---21121-11111----11--11-11231-------1----71111----2322222122-1213322544131213111231------32------------------------------------------------------------------------------------------21--2-----------1--------------1---1----2-1----1-----1-------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------1---------------1--3--------------1-1-3--------21--------------------------------11-1-------------------------11-----------------------------------------------------------------------------------------------1------------------------------------------------------------------------11111------12-3-------------------------------------------------------1--11-------- ----21-----------------------1------1-----------11-141112-----1---------------------1-----------------------11---------------------------------------------------------------------------1-------1----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 363 STR:RPRED 79.8 SQ:SECSTR ############################TTccccccccccccccccccccccccccTcccTHHHHTTHHHHHHTTccTTcEEEEEEccccTTcTTccEEEEEEccTTccTTccccccHHHHHHHHHHcccccccccccccTTcEEEEEEcccTEEEcccTTccHHHHHHTTccccHHHHHHHHHHHHHTTccEEEEcEEcccccccHHHHHHHHHHHHHHHHTTcEEEEEccccccGGTcccccccTTccccTTccTTccccccTTTcTTcEEEEEEcTTccccTTccccTTccEEEEcccEEEEETTTEEEETTEEETTTEEEEEccHHHHHHHHHHHHHHHHHHcTTccHHHHHHHHHHTccccEEccHHHHTTccccHHHHTTTEEEE################################################################ DISOP:02AL 1-3, 30-45, 410-415, 450-455| PSIPRED cccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccHHHHHccccccEEEEEEEccccccccccccEEEEEcccccccccccccccHHHHHHHHHccccccccEEEEccccEEEEEEEcccccccccccHHccccccccccccHHHHHHHHHHHHHccccEEEEEEcccccccccccHHHHHHHHHHHHHccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccEEEEcccccccccccccccccEEEEcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccEEEEEEcHHHHHHHHccccccccccccccccEEEcccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHccccccccc //