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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55695.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  19/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.15.1
:488 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  20->116 1v6eA  d.15.1.1 * 7e-04 13.2 %
:RPS:PFM   77->220,373->487 PF04600 * DUF571 6e-16 43.4 %
:HMM:PFM   52->487 PF04600 * DUF571 1.5e-117 40.3 419/425  
:HMM:PFM   31->62 PF07100 * ASRT 0.00014 43.8 32/121  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55695.1 GT:GENE BAD55695.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(942745..944211) GB:FROM 942745 GB:TO 944211 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55695.1 LENGTH 488 SQ:AASEQ MTHARLDHIDEDSSRGIVRAPDLARVTILAKHTQVDMAIPVDVPVALVIPSVVDMVAQHSRSNDFDNEGERFEPAEWVLARIGHPPFSNSLSLGEHGVRDGELLMLESASHTAPTPLFDDIMYNVAIADADHFRGWTPETARLTGSVLAAVTMLVGCLGLLASPAAMPEWVSGSIALAVVILLVVAGMVLSRMYGDTATALVLGGCALPAAFTAGMLYVPDHYGWAHLLLGGTLLGATAILAWRVTGVGLALFIGTAAVAVYLVPAALVGLLTDQPLRAIGAVAAALGLAGLSLAPRLSMLLAKLPLPPVPSPGTPIDPTEDDPDDHRALPTMEALRVKSERARMYLAGLVAATTLVTAAGALAATDPQADDPYWQGIALALVCAVVLMFRSRTYAGAEQAVVLIAGGAAIVLIMLVGAAFTMEIPLAVFGATMLMLVAALILGIIIPNQSATPPMRRGVELLEYAFVAAVLPLVFWVTSLYSLVRGL GT:EXON 1|1-488:0| TM:NTM 12 TM:REGION 36->58| TM:REGION 143->165| TM:REGION 171->193| TM:REGION 197->218| TM:REGION 224->246| TM:REGION 251->273| TM:REGION 283->305| TM:REGION 346->366| TM:REGION 371->390| TM:REGION 401->423| TM:REGION 429->451| TM:REGION 463->485| SEG 175->186|ialavvillvva| SEG 224->243|gwahlllggtllgatailaw| SEG 257->272|aavavylvpaalvgll| SEG 276->299|plraigavaaalglaglslaprls| SEG 301->326|llaklplppvpspgtpidpteddpdd| SEG 347->366|laglvaattlvtaagalaat| SEG 401->414|avvliaggaaivli| RP:PFM:NREP 1 RP:PFM:REP 77->220,373->487|PF04600|6e-16|43.4|258/427|DUF571| HM:PFM:NREP 2 HM:PFM:REP 52->487|PF04600|1.5e-117|40.3|419/425|DUF571| HM:PFM:REP 31->62|PF07100|0.00014|43.8|32/121|ASRT| RP:SCP:NREP 1 RP:SCP:REP 20->116|1v6eA|7e-04|13.2|91/95|d.15.1.1| OP:NHOMO 21 OP:NHOMOORG 19 OP:PATTERN -------------------------------------------------------------------- ----1---------1--11-1-----11111-----21-1-1------------------11--112-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-3, 60-70| PSIPRED cccccccccccccccccccccccEEEEEEcccEEEEEEccccccHHHHHHHHHHHHcHHHccccccccccccccEEEEEEEcccccccHHccccccccccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //