[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55706.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  3/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:401 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   166->366 2bbjA PDBj 6e-04 14.4 %
:RPS:PFM   265->371 PF00285 * Citrate_synt 7e-04 33.7 %
:BLT:SWISS 97->192 GATA_LACBA 3e-04 28.7 %
:BLT:SWISS 289->385 TITIN_MOUSE 5e-04 21.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55706.1 GT:GENE BAD55706.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(958849..960054) GB:FROM 958849 GB:TO 960054 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55706.1 LENGTH 401 SQ:AASEQ MVRTSRIATIVAWVAAAATLAGCGAVSGTALPAEPDVRRLEVGTYPVTRHSYDQNSAGKGALLEGMRMSEAVVPTVTIDPSLKFGRGSTVLTDSEHALDFLAKVSKPVLDNRKLVTGFAASGADEPDPAGETRPAPDTTAVTDVVLRFPDEATAKLAARELEDADIGVSPENQRLGSTKYPDAYIHWRPGIANVGAFIAHRQFVVSLFIQRPRADSTDLVKWIDKTLDAQLPALDRFQPTPVDRLDTLKVDPDGLLARVVVAERTDREPDPADFAIYGPNHAVHVSDDESATLRLVEQTGADKIAVVDAGSVTRVRDAEAAPRLIDGMIDTAGEQFDPIDAPKDVPGAKCLQLNDRGDLEREYKYRCYVPYKRYVGIVTSDKEPDVRQKVAAQYALFANSL GT:EXON 1|1-401:0| BL:SWS:NREP 2 BL:SWS:REP 97->192|GATA_LACBA|3e-04|28.7|94/489| BL:SWS:REP 289->385|TITIN_MOUSE|5e-04|21.6|97/100| SEG 7->25|iativawvaaaatlagcga| RP:PDB:NREP 1 RP:PDB:REP 166->366|2bbjA|6e-04|14.4|187/334| RP:PFM:NREP 1 RP:PFM:REP 265->371|PF00285|7e-04|33.7|98/347|Citrate_synt| GO:PFM:NREP 2 GO:PFM GO:0044262|"GO:cellular carbohydrate metabolic process"|PF00285|IPR002020| GO:PFM GO:0046912|"GO:transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer"|PF00285|IPR002020| OP:NHOMO 8 OP:NHOMOORG 3 OP:PATTERN -------------------------------------------------------------------- --------------1-------------------1-6-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 187 STR:RPRED 46.6 SQ:SECSTR #####################################################################################################################################################################ccccccccEEEEEEEcccEEEEE##EcccTTTcGGGGccccEEEEEEcTTcHHHHHHHHHHHTHHHHHHcTTccccEEEcccEEE####EEEEEEEEccccccEEEEEEEEEETTEEEEEEcccccccHHHHHTTcTTTTTccHHHHHHH########HHHHHHHHHHHHHHHHHTTTHHHHHHHHHcccHHHHHHHHHHH################################### DISOP:02AL 1-4| PSIPRED cccHHHHHHHHHHHHHHHHHHHccccccccccccccHHEEccccccccccccccccccHHHHHHHHHHHHHccccHHcccHHHHccccEEEEcccccccccHHHHHHHHHHccccccEEEcccccccccccccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHccccccccccccccccEEEcccHHHHHHHEEEccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHcccccccccHHHHccccHHHHHEEEEccccccccccccccccccccEEEEEcccHHHHHHHHHHcccEEEEEEEEEEEEEEccHHHHHHHHHHHHHccccccccccccccccccEEEEEccccccccccccEEEEEEccEEEEEEEcccHHHHHHHHHHHHHHHHcc //