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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55707.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  8/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.26.1
:460 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   337->450 2kklA PDBj 2e-05 38.9 %
:RPS:PDB   327->447 2cswA PDBj 5e-06 19.2 %
:RPS:SCOP  340->458 1lgpA  b.26.1.2 * 4e-10 19.4 %
:HMM:SCOP  332->460 1uhtA_ b.26.1.2 * 8.5e-13 31.9 %
:HMM:PFM   382->444 PF00498 * FHA 1.3e-07 34.5 55/68  
:BLT:SWISS 199->286 VGLC_VZVD 4e-04 39.2 %
:BLT:SWISS 382->450 Y1858_MYCBO 2e-04 46.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55707.1 GT:GENE BAD55707.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 960135..961517 GB:FROM 960135 GB:TO 961517 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55707.1 LENGTH 460 SQ:AASEQ MQYPGAHGQHPCPDRPRRPIPVKDRQVEVVAGGHAVARVSGALLVVAHRGAAPLTPASPAALALTDLAELVREAQRHRPDGPGALVAREATRWLMKRAERISPGVPIDFGIVSPAEHGGLAVFLHGAITAVLAGDGGVELLRGSDAAFTVDRVAPVPARAAALFADDAHGRVPDLPAAPGIGSLVEGVAQAGGAILWTDAALAETAPAGRGAEPAPVPTARIDREPRAYAPTERDLAPATGAQEQVPGHTETQASTSMLDSVEEQHPDRHAAHTLAGTNPAPRPDPDLQRRLEATAKATALTVKVLGFKCARAHPSDPRSAFCTVCGMPVDQTQALIEVVRPPLGMLVLDDGMTYMLAADAVLGRDPEHSDAAQRGLVPLKVDDASGGMSRAHAEIRLVNWDVTVVDRGSTNGTRTRLPGYRDWVRLNPGQPMILVPGAEVMLGNRVLRFEPIAPPPFGG GT:EXON 1|1-460:0| BL:SWS:NREP 2 BL:SWS:REP 199->286|VGLC_VZVD|4e-04|39.2|79/100| BL:SWS:REP 382->450|Y1858_MYCBO|2e-04|46.6|58/162| SEG 51->68|aapltpaspaalaltdla| SEG 150->168|vdrvapvparaaalfadda| SEG 294->306|atakataltvkvl| BL:PDB:NREP 1 BL:PDB:REP 337->450|2kklA|2e-05|38.9|95/140| RP:PDB:NREP 1 RP:PDB:REP 327->447|2cswA|5e-06|19.2|104/145| HM:PFM:NREP 1 HM:PFM:REP 382->444|PF00498|1.3e-07|34.5|55/68|FHA| RP:SCP:NREP 1 RP:SCP:REP 340->458|1lgpA|4e-10|19.4|103/113|b.26.1.2| HM:SCP:REP 332->460|1uhtA_|8.5e-13|31.9|113/118|b.26.1.2|1/1|SMAD/FHA domain| OP:NHOMO 8 OP:NHOMOORG 8 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1----111--1-----111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 114 STR:RPRED 24.8 SQ:SECSTR ######################################################################################################################################################################################################################################################################################################################################cccccTTccEEEEccTTcccccEcTTEEccTTccEEEEccTTcccc#####EEccccccGGGccTTcEEEEEcTTccEEEcccccccE######EEcccccccTccEEccccccEEEccccEEEE######### DISOP:02AL 1-8, 76-77, 259-262, 458-460| PSIPRED cccccccccccccccccccccccccEEEEEEcccEEEEcccEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccEEEccccccccccEEEEEEcEEEEEEEccccEEEEEccccEEEEccccccccHHHEEEEcccccccccccccccHHHHHHHHHHHccEEEEEcHHHHHccccccccccccccHHHcccccccccccccccccccccHHHcccccHHHHHHHHHHHHHHHcccHHHHHHHccccccccccHHHHHHHHHHHHHHEEEEEEEEEEEEcccccccHHHHHHHccccHHHHHHHHHHHcccccEEEEccccEEEEEHHHHHccccccHHHHHHccEEEEEccccccccccEEEEEEEEEEEEEEEccccccccccccccccEEEEcccccEEEEccccEEEccEEEEEEccccccccc //