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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55709.1
DDBJ      :             putative ABC transporter ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  908/915 : Eukaryota  197/199 : Viruses  0/175   --->[See Alignment]
a.120.1b.26.1c.37.1
:859 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   5->91 2ff4B PDBj 5e-06 30.3 %
:BLT:PDB   224->293 2kklA PDBj 9e-08 37.1 %
:BLT:PDB   318->516 2it1B PDBj 3e-24 37.2 %
:RPS:PDB   4->91 2affA PDBj 2e-13 20.0 %
:RPS:PDB   216->290 2affA PDBj 1e-14 28.0 %
:RPS:PDB   299->526 3cmvH PDBj 1e-35 15.9 %
:RPS:PDB   584->697 1c1kA PDBj 1e-05 2.9 %
:RPS:SCOP  1->91 1r21A  b.26.1.2 * 3e-14 20.7 %
:RPS:SCOP  216->292 2fezA3  b.26.1.2 * 1e-15 36.4 %
:RPS:SCOP  307->516 1sgwA  c.37.1.12 * 1e-33 23.1 %
:RPS:SCOP  584->697 1c1kA  a.120.1.1 * 1e-06 2.9 %
:HMM:SCOP  12->106 1uhtA_ b.26.1.2 * 3.6e-18 37.9 %
:HMM:SCOP  169->291 1g3gA_ b.26.1.2 * 7.6e-27 37.4 %
:HMM:SCOP  309->517 1ii8.1 c.37.1.12 * 3.2e-56 35.7 %
:RPS:PFM   26->93 PF00498 * FHA 4e-12 43.5 %
:RPS:PFM   221->284 PF00498 * FHA 1e-12 54.7 %
:RPS:PFM   347->470 PF00005 * ABC_tran 2e-14 36.4 %
:HMM:PFM   26->93 PF00498 * FHA 2.1e-16 35.9 64/68  
:HMM:PFM   223->284 PF00498 * FHA 3.2e-19 51.6 62/68  
:HMM:PFM   347->470 PF00005 * ABC_tran 2.2e-24 43.0 114/118  
:HMM:PFM   585->805 PF01061 * ABC2_membrane 1.3e-21 26.8 194/208  
:HMM:PFM   434->511 PF02463 * SMC_N 7.2e-05 26.0 77/220  
:HMM:PFM   332->360 PF03193 * DUF258 2.5e-05 27.6 29/161  
:BLT:SWISS 18->90 RNF8_DANRE 1e-05 41.7 %
:BLT:SWISS 222->294 ODHI_CORJK 3e-08 37.0 %
:BLT:SWISS 313->521 AB27G_ARATH 2e-32 39.8 %
:PROS 442->456|PS00211|ABC_TRANSPORTER_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55709.1 GT:GENE BAD55709.1 GT:PRODUCT putative ABC transporter ATP-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 963078..965657 GB:FROM 963078 GB:TO 965657 GB:DIRECTION + GB:PRODUCT putative ABC transporter ATP-binding protein GB:PROTEIN_ID BAD55709.1 LENGTH 859 SQ:AASEQ MSSPGAQTITVRHDGTERVFDSSQLVTLGRAPEVTLFVDSPLVSRVHATLTWQGSGWVLTDNGSTNGVFVDARRLTQPVSIDRPTQVRLGDAINGPLLHLLPAAPAQRPHPPQGAPSQGSPQQGAPQHRPPQRPSYQRPPTPPYQPPHAAARPGAAASGPQQAAPPSTGAAPARPTPPPASQQQPNVNMTTKADTSALPPLRARASTAAIARADRLPPGGLAIGRTTDNQIVVNDPLASRKHARLVAGREGLTIEDLGSANGTFVNGTRQQRAVLREGDVITIGNIDFVVQHGTLVLRQKPVAEQGLHVHGVGFTVEGNKQLLVDVNMQAGRGTLTALIGPSGAGKSTLSKLIAGSTQPSGGVVTFEGRNLHAEYEALRSRIGMVPQDDVLHRQLTVRQALGYAAELRLPPDTTKADRQQVIDGVLQELSLTEHADTRVDRLSGGQRKRASVALELLTGPSLLILDEPTSGLDPALDRQVMVMLRELADAGRVVIVVTHSVACLDMCDQVLLLAPGGKTAFCGHPAGVGAALGTSDWAEIFANVAANPDQAFAAYRSRQAVAPPPPPPPRYGPAGSPPQTSSIKQFSTLARRQLRLIVSDRVYSLSLLLMPIIVGAVTLATPGKNGFQPPPLVQTPEGIGPAVSGEAQTLLSFLVIGACFMGISLSVRDLVGERTIFLRERAVGLSSTAYLLAKILVFSLAAVYQVAVMLAIVLVGKNGPRAGVVIPPGAVELFVDITLLAVCSVVLGLLISSLVKSNEQVMVVLVIAIIVQLVMMGSFIPVTGRPGLEQVSWLFPSRWGFAASASTVDLTTLFVKAEQDTLWQHTAQWWVIDVSVLAAIALVLALFTRRNLRLKKSAT GT:EXON 1|1-859:0| BL:SWS:NREP 3 BL:SWS:REP 18->90|RNF8_DANRE|1e-05|41.7|72/485| BL:SWS:REP 222->294|ODHI_CORJK|3e-08|37.0|73/144| BL:SWS:REP 313->521|AB27G_ARATH|2e-32|39.8|206/737| PROS 442->456|PS00211|ABC_TRANSPORTER_1|PDOC00185| TM:NTM 8 TM:REGION 526->548| TM:REGION 602->624| TM:REGION 647->669| TM:REGION 689->711| TM:REGION 728->750| TM:REGION 761->783| TM:REGION 788->810| TM:REGION 827->848| SEG 95->185|gpllhllpaapaqrphppqgapsqgspqqgapqhrppqrpsyqrpptppyqpphaaarpgaaasgpqqaappstgaaparptpppasqqqp| SEG 202->215|rarastaaiaradr| SEG 562->578|appppppprygpagspp| SEG 742->757|vcsvvlgllisslvks| SEG 760->776|qvmvvlviaiivqlvmm| SEG 831->846|vidvsvlaaialvlal| BL:PDB:NREP 3 BL:PDB:REP 5->91|2ff4B|5e-06|30.3|87/373| BL:PDB:REP 224->293|2kklA|9e-08|37.1|70/140| BL:PDB:REP 318->516|2it1B|3e-24|37.2|191/361| RP:PDB:NREP 4 RP:PDB:REP 4->91|2affA|2e-13|20.0|88/98| RP:PDB:REP 216->290|2affA|1e-14|28.0|75/98| RP:PDB:REP 299->526|3cmvH|1e-35|15.9|226/1173| RP:PDB:REP 584->697|1c1kA|1e-05|2.9|102/217| RP:PFM:NREP 3 RP:PFM:REP 26->93|PF00498|4e-12|43.5|64/68|FHA| RP:PFM:REP 221->284|PF00498|1e-12|54.7|64/68|FHA| RP:PFM:REP 347->470|PF00005|2e-14|36.4|121/123|ABC_tran| HM:PFM:NREP 6 HM:PFM:REP 26->93|PF00498|2.1e-16|35.9|64/68|FHA| HM:PFM:REP 223->284|PF00498|3.2e-19|51.6|62/68|FHA| HM:PFM:REP 347->470|PF00005|2.2e-24|43.0|114/118|ABC_tran| HM:PFM:REP 585->805|PF01061|1.3e-21|26.8|194/208|ABC2_membrane| HM:PFM:REP 434->511|PF02463|7.2e-05|26.0|77/220|SMC_N| HM:PFM:REP 332->360|PF03193|2.5e-05|27.6|29/161|DUF258| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 4 RP:SCP:REP 1->91|1r21A|3e-14|20.7|91/100|b.26.1.2| RP:SCP:REP 216->292|2fezA3|1e-15|36.4|77/99|b.26.1.2| RP:SCP:REP 307->516|1sgwA|1e-33|23.1|195/200|c.37.1.12| RP:SCP:REP 584->697|1c1kA|1e-06|2.9|102/217|a.120.1.1| HM:SCP:REP 12->106|1uhtA_|3.6e-18|37.9|95/118|b.26.1.2|1/2|SMAD/FHA domain| HM:SCP:REP 169->291|1g3gA_|7.6e-27|37.4|123/164|b.26.1.2|2/2|SMAD/FHA domain| HM:SCP:REP 309->517|1ii8.1|3.2e-56|35.7|207/370|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 52589 OP:NHOMOORG 1173 OP:PATTERN WWPBQNGJUTTPSPVMoKMQMNRY*RWmpciVHBEDECGEGCEWcQYnNR**j9PZOTaOPMLEY299 VeuQ*jjiqqsYhXcWZOO-OiCCb*PPPPPQuuuw****X*h****p*siP***SWkFF***q*u****icfee*gffR*mrDAB8BTSSM6NFKL--GFTLLNlOcSR7888788BBAAAAAJWSKUaQPWUZTptt**NMM*d*it*ihpagVXVORMRNkjap***bHSJNHHIVIPIHideOOohAag*************************ls***mt****y***Zkmmlmjgjjllkjiafbbd*lde**eSedh*zST**faRbkjfeisqv*wt***ztwsqpnsyrutffeedffghfeee*pqhgjtsupt***********m*nu***ejkg*sjpv*ltSL**qmacgpRZkaoqQWahLiWTTMNOMMPgV***aUv****************-rx*oh*r***UC**************KOO**********UTUUUUUUuglNTmd*77666555777977AB87A98577898B6IEFGEH***************y********m********CN**u*iuns******ZppQYMSnVJJKJJKKQTQjrnc**ShTurWpvhfoKhedTVZmWcecZfx*a*JLNQFHGGIGE7B9AA9A99HOBFLUTusxRxWdKTLxRXbcYPWfZXXXSZcaZbZ7-GMdQO221222*y**Z**z*******xy-*yyz*y*******vwywvv*****lpfnpklmonnnnllollk*toquusuU3************34IJCEBCDPPRPPG*s*ZZaZZXJOQMKUQVeNPROPGUHOVtiy**yy***w****o***FDECDEEDDLjsr*suttu****zQRROPPNNPOFDED55PRVUKLIK77768767*EWA8A9D-69B7DC8EBC6AFA76668YlpRVi*ijiEfT 2333lmP-pQ9FVbUOOWNTXjbneogNNIKILVSSJPKOJOOIIGTOSeicyjUUTHKJIJG9EA994BA9DDBHE2EFECABFI58-JUFOGJJHEHEHDKXQL8a*rxdhepfZMLJFNXP**I*K**q4sWxOQKGjJNnZGQJIEfIE*LeUVyMk*PsQmN*hl*YibLJZWR*JPJWc****R**PS***** ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-3, 114-229, 263-285, 552-578, 858-859| PSIPRED cccccccEEEEEEcccEEEEEccccEEEEEcccccEEEccHHEEEEEEEEEEcccEEEEEEccccccEEEEcEEEEEEEEEccccEEEEccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccHHHHcccccccEEcccccccHHHcccccccccccccccccccEEccccccccccccccccccccccccccccccccccEEcccccccccccccccEEEEEEEEEEEcccEEEEEcccEEEEccEEEEEEccccccHHHHHHHHHccccccccEEEEEccccHHHHHHHHHHccccEEEccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccHHHHccccccccHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHccEEEEEcccEEEEEccHHHHHHHcccccHHHHHHHHHcccHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHccccc //