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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55715.1
DDBJ      :             putative ABC transporter ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  854/915 : Eukaryota  194/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:550 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   11->229,373->424,472->545 2ix3A PDBj 6e-11 32.0 %
:RPS:PDB   8->550 3cmvG PDBj 1e-24 11.8 %
:RPS:SCOP  5->226 1b0uA  c.37.1.12 * 3e-18 22.4 %
:RPS:SCOP  366->534 1sgwA  c.37.1.12 * 3e-17 14.4 %
:HMM:SCOP  8->229 1ii8.1 c.37.1.12 * 8.7e-41 34.1 %
:HMM:SCOP  382->545 1ii8.1 c.37.1.12 * 1.5e-34 39.5 %
:RPS:PFM   44->187 PF00005 * ABC_tran 7e-05 38.3 %
:HMM:PFM   44->187 PF00005 * ABC_tran 2.6e-18 39.8 103/118  
:HMM:PFM   394->500 PF00005 * ABC_tran 2.3e-13 35.6 104/118  
:HMM:PFM   471->535 PF02463 * SMC_N 0.00014 27.7 65/220  
:HMM:PFM   30->54 PF03308 * ArgK 0.00056 52.0 25/267  
:BLT:SWISS 5->549 YDIF_BACSU 1e-51 33.9 %
:PROS 159->173|PS00211|ABC_TRANSPORTER_1
:REPEAT 2|31->218|381->531
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55715.1 GT:GENE BAD55715.1 GT:PRODUCT putative ABC transporter ATP-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(970583..972235) GB:FROM 970583 GB:TO 972235 GB:DIRECTION - GB:PRODUCT putative ABC transporter ATP-binding protein GB:PROTEIN_ID BAD55715.1 LENGTH 550 SQ:AASEQ MSTTLHARGLSAGHGERTLFDDLDLTIAPGDVIGLVGVNGAGKSTLLRMLAARETPTGTITLSPPDATVGYLAQEPERVPGETVLDFLGRRTGVTAAQRAMDAAAERLAEGGPDEYSPALERWLALGGADLEARAQEVAADLGLADSLADGLGTPMTALSGGQAARAGLASVLLSRYDILLLDEPTNDLDLDGLARLEDFVRGVRVPLVVISHDREFLARTVNRIVELDLAQQQVGLYDGGYEAYLAEREIARRHAREAFEEYADTRAALEARAQMQRNWLEHGVRNARRKARDPRKLDSDKAGRKMRAEATEKQAAKARQTQRRIERLEVVEEPRKEWELRMTIAAAPRSGAVVATATDAVVTRGDFRLGPVTTQIDWADRIVLTGANGAGKSTLLGLLLGRIAPDSGSAALGSGVEIGEVDQARGLFRGTTPLAERFGREMPDWPDAEIRTLLAKFGLRGPHVLRACDTLSPGERTRAALALLQARGVNLLVLDEPTNHLDLPAIEQLEQAVDSFTGTLLLVTHDRRMLDSVRATRRWHLRDGLLRED GT:EXON 1|1-550:0| BL:SWS:NREP 1 BL:SWS:REP 5->549|YDIF_BACSU|1e-51|33.9|507/642| PROS 159->173|PS00211|ABC_TRANSPORTER_1|PDOC00185| NREPEAT 1 REPEAT 2|31->218|381->531| SEG 96->110|aaqramdaaaerlae| SEG 139->153|aadlgladsladglg| SEG 247->264|aereiarrhareafeeya| SEG 353->364|avvatatdavvt| SEG 480->485|aalall| BL:PDB:NREP 1 BL:PDB:REP 11->229,373->424,472->545|2ix3A|6e-11|32.0|300/972| RP:PDB:NREP 1 RP:PDB:REP 8->550|3cmvG|1e-24|11.8|485/1167| RP:PFM:NREP 1 RP:PFM:REP 44->187|PF00005|7e-05|38.3|115/123|ABC_tran| HM:PFM:NREP 4 HM:PFM:REP 44->187|PF00005|2.6e-18|39.8|103/118|ABC_tran| HM:PFM:REP 394->500|PF00005|2.3e-13|35.6|104/118|ABC_tran| HM:PFM:REP 471->535|PF02463|0.00014|27.7|65/220|SMC_N| HM:PFM:REP 30->54|PF03308|0.00056|52.0|25/267|ArgK| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 2 RP:SCP:REP 5->226|1b0uA|3e-18|22.4|214/258|c.37.1.12| RP:SCP:REP 366->534|1sgwA|3e-17|14.4|169/200|c.37.1.12| HM:SCP:REP 8->229|1ii8.1|8.7e-41|34.1|217/370|c.37.1.12|1/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 382->545|1ii8.1|1.5e-34|39.5|162/370|c.37.1.12|2/2|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 4358 OP:NHOMOORG 1058 OP:PATTERN ---------------11-1-----1--1-12---1-------------1--1---------------- 345-643766734373333-372237333333689877581548656544437464541187748466AD3333354344532-----6666-6331-1346544566151111111111111142222222222222222111513211112132222223222122332122211121221223----221688A89878598989953775599721296665555556943333333333333343355635344343335533566443424444445435544555555556554444544444444655444555417658666777777646554544B42132453-88441-11--231-1235-3355522322555554345544644444444447-4545435637328664664666655534434445433534444444445553658----------222133124221221-----244334553456655555555445555555564654561256533533533334444434354444344433354573535443435333256675554555656942322212222221111111113311333664454555555667655555555555575--433441--22255565655555555555-5555555555555555555666655664755555555555554755555554-534555555555--23121114544445463336333343423233333333333455555555644667456631222332144556444445676555444444443333224155444411111111322----1-11111--11111--1----12111-1----42 1211446-733133444334444454332444454432222223333333323333312222222222222223222-2222222233-4444243222242336514O54453347323333233253PT5-6371211313341323142-62322538835343433D3344476E*DAA4694AC255BB8555B ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 281-297, 304-334, 548-550| PSIPRED cccEEEEEEEEEEEccEEEEEccEEEEccccEEEEEccccccHHHHHHHHHccccccccEEEEccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHcccHHHcccHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHcccEEEEEEccHHHHHHHccEEEEEEccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEccccccccccEEEEEcEEEEcccEEEccEEEEEEcccEEEEEccccccHHHHHHHHHccccccccEEEEccEEEEEEEcccHHHccccccHHHHHHHHcccccHHHHHHHHHHHcccHHHHcccHHHccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHccEEEEEEccHHHHHHHcccEEEEEEccEEEEc //