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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55720.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  37/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:287 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->78 2fx5A PDBj 4e-04 37.3 %
:RPS:PDB   31->77 1auoA PDBj 2e-04 10.6 %
:RPS:SCOP  31->77 1auoA  c.69.1.14 * 2e-05 10.6 %
:HMM:SCOP  30->260 1jfrA_ c.69.1.16 * 7.1e-21 33.2 %
:RPS:PFM   29->76 PF07224 * Chlorophyllase 4e-05 41.7 %
:HMM:PFM   106->209 PF01738 * DLH 2.6e-05 22.3 103/217  
:HMM:PFM   30->130 PF07224 * Chlorophyllase 7e-05 30.0 100/307  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55720.1 GT:GENE BAD55720.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(975913..976776) GB:FROM 975913 GB:TO 976776 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55720.1 LENGTH 287 SQ:AASEQ MSASVKELLSTLTRRGPHRVLRGNLGIAGQPGVVYTPETGRGLPAVAFGHSWLTGVSHYRGLLEHLASWGIVTAAPDTERGPIPSHLGLATDLLTTLDICTGVRLGDGTVTVHPDRLALAGHGMGAGAAVIAAAQRRVGTVVALFPAPTAPAAEPLAADLDIPALLLAGAVDISSVSSNALPLAAAWSGPATLRVVDGATHNGLVEGRRALAALGAGKHEPKTARTVRALLTGYLLHTLTDDKTYAPFADPDTEIPRTTVVDPNAPRDEEQEKPKLSVGTLRKLVRG GT:EXON 1|1-287:0| SEG 91->98|tdllttld| SEG 118->134|alaghgmgagaaviaaa| SEG 143->170|alfpaptapaaeplaadldipalllaga| SEG 207->217|grralaalgag| BL:PDB:NREP 1 BL:PDB:REP 9->78|2fx5A|4e-04|37.3|67/258| RP:PDB:NREP 1 RP:PDB:REP 31->77|1auoA|2e-04|10.6|47/218| RP:PFM:NREP 1 RP:PFM:REP 29->76|PF07224|4e-05|41.7|48/128|Chlorophyllase| HM:PFM:NREP 2 HM:PFM:REP 106->209|PF01738|2.6e-05|22.3|103/217|DLH| HM:PFM:REP 30->130|PF07224|7e-05|30.0|100/307|Chlorophyllase| RP:SCP:NREP 1 RP:SCP:REP 31->77|1auoA|2e-05|10.6|47/218|c.69.1.14| HM:SCP:REP 30->260|1jfrA_|7.1e-21|33.2|205/260|c.69.1.16|1/1|alpha/beta-Hydrolases| OP:NHOMO 37 OP:NHOMOORG 37 OP:PATTERN -------------------------------------------------------------------- -----11111111111111-11111111111111111111------------------------111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 70 STR:RPRED 24.4 SQ:SECSTR ########cccTTccccccEEEEEETTTEEcccEEEcccccccEEEEEEccTTccTTTTHHHHHHHHTTcTTEEEEEc################################################################################################################################################################################################################# DISOP:02AL 1-3| PSIPRED ccHHHHHHHHHHHHcccEEEEEEccEEccccEEEEEcccccccEEEEEEccccccHHHHHHHHHHHHHccEEEEEEEcccccccccccHHHHHHHHHHHHHHHHccccccccccccEEEEEEcccHHHHHHHHccccccEEEEEcccccccccccccccccccEEEEEccccccccccccHHHHHcccccEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccHHcccccccccccEEccccccccccccccccccccHHHHHHHHcc //