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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55725.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  39/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:360 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   66->120 2e3jA PDBj 5e-05 42.3 %
:BLT:PDB   285->336 3e3aB PDBj 5e-05 36.5 %
:RPS:PDB   62->336 3e3aB PDBj 2e-15 18.6 %
:RPS:SCOP  61->336 1mt3A  c.69.1.7 * 1e-17 16.7 %
:HMM:SCOP  53->340 1q0rA_ c.69.1.28 * 4.2e-52 34.7 %
:RPS:PFM   277->326 PF00561 * Abhydrolase_1 3e-07 49.0 %
:HMM:PFM   108->336 PF00561 * Abhydrolase_1 9.7e-30 34.6 217/231  
:HMM:PFM   62->135 PF12146 * Hydrolase_4 6.3e-07 25.4 71/79  
:BLT:SWISS 57->123 YTXM_BACSU 1e-05 42.6 %
:BLT:SWISS 261->330 BIOH_NITEU 2e-06 33.3 %
:PROS 150->159|PS00120|LIPASE_SER
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55725.1 GT:GENE BAD55725.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 982139..983221 GB:FROM 982139 GB:TO 983221 GB:DIRECTION + GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD55725.1 LENGTH 360 SQ:AASEQ MRGRIGRGGFATAVLVGALAGAHVVRRLGQWVLHLDVPDAYVAEDFALFEADEPSTVTATDGVPLAVRAHGPENADVTMVFVHGFCNSMESFHFQRRDLPARWGPRVRLVFFDQRGHGRSGTPSTDSCTVPQLGRDVAAVLAAAAPSGPVVLVGHSLGGMAVLAAAAQFPALFGSRVAAVALLSTSAAQVTSTGITQLLRNPVIDGFRLAVEAAPALVQAARTAGRHVITPLLHVTSFHGPVSPALSRFTARMIDRTPVETIVKFLEAIRVHDESAALSTLAQLPVLVLGGTRDVVMPFRNSEALARELPDSELVLLPGAAHMPHLQYPDLVNDALHRLMVRAGVFRRGRSRRDGRTGSA GT:EXON 1|1-360:0| BL:SWS:NREP 2 BL:SWS:REP 57->123|YTXM_BACSU|1e-05|42.6|61/274| BL:SWS:REP 261->330|BIOH_NITEU|2e-06|33.3|69/252| PROS 150->159|PS00120|LIPASE_SER|PDOC00110| SEG 8->25|ggfatavlvgalagahvv| SEG 137->154|vaavlaaaapsgpvvlvg| SEG 161->173|avlaaaaqfpalf| SEG 177->188|vaavallstsaa| SEG 209->221|laveaapalvqaa| SEG 342->358|ragvfrrgrsrrdgrtg| BL:PDB:NREP 2 BL:PDB:REP 66->120|2e3jA|5e-05|42.3|52/346| BL:PDB:REP 285->336|3e3aB|5e-05|36.5|52/275| RP:PDB:NREP 1 RP:PDB:REP 62->336|3e3aB|2e-15|18.6|253/275| RP:PFM:NREP 1 RP:PFM:REP 277->326|PF00561|3e-07|49.0|49/211|Abhydrolase_1| HM:PFM:NREP 2 HM:PFM:REP 108->336|PF00561|9.7e-30|34.6|217/231|Abhydrolase_1| HM:PFM:REP 62->135|PF12146|6.3e-07|25.4|71/79|Hydrolase_4| RP:SCP:NREP 1 RP:SCP:REP 61->336|1mt3A|1e-17|16.7|263/293|c.69.1.7| HM:SCP:REP 53->340|1q0rA_|4.2e-52|34.7|277/297|c.69.1.28|1/1|alpha/beta-Hydrolases| OP:NHOMO 52 OP:NHOMOORG 40 OP:PATTERN -------------------------------------------------------------------- ----1111111--1111----21111-----111112244-2121---------------121-111111------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 316 STR:RPRED 87.8 SQ:SECSTR #########################HHHHHHTccTTcHHHHHcEEEEEcccccccEEEEETccEEEEEEEcccEcccEEEEEccTTccGGGGTTTHHHHHHHHHTTEEEEEEccTTcGGGTTcccccccHHHHHHHHHHHHHHTTcccEEEEEEETHHHHHHHHHHHHcGGGEEEEEEEEEccccccGGEcccccccHHHHHHHHHHHHHHHTTccccHHHHHHHHHHccHHccHHHHTcHHHHHHHHHHHHHccccccHHHHHHTTcccccccGGGGGGcccccEEEEEETTcccccHHHHHHHHHHcTTEEEEEETTccTTHHHHcHHHHHHHHHHHHH################### DISOP:02AL 345-360| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHcccccccEEEEcccEEEEEEEEcccccccEEEEEccccccHHHHHHHHHHHHHHHccccEEEEEEccccccccccccccccHHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHHccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHcccEEEEEccccccccHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHHHHHcccccccccccccccccc //