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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55729.1
DDBJ      :             putative glycoprotease
Swiss-Prot:GCP_NOCFA    RecName: Full=Probable O-sialoglycoprotein endopeptidase;         Short=Glycoprotease;         EC=3.4.24.57;

Homologs  Archaea  46/68 : Bacteria  904/915 : Eukaryota  162/199 : Viruses  0/175   --->[See Alignment]
c.55.1
:344 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->322 2ivnA PDBj 3e-21 35.7 %
:RPS:PDB   101->321 1bwfY PDBj 2e-15 16.3 %
:RPS:SCOP  1->123 1okjA1  c.55.1.9 * 5e-11 17.6 %
:RPS:SCOP  105->314 2i7nA2  c.55.1.14 * 1e-25 12.0 %
:HMM:SCOP  1->319 1huxA_ c.55.1.5 * 3.1e-28 34.7 %
:RPS:PFM   46->313 PF00814 * Peptidase_M22 4e-38 43.9 %
:HMM:PFM   24->312 PF00814 * Peptidase_M22 3.8e-89 52.5 265/268  
:BLT:SWISS 1->344 GCP_NOCFA e-166 100.0 %
:PROS 95->115|PS01016|GLYCOPROTEASE
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55729.1 GT:GENE BAD55729.1 GT:PRODUCT putative glycoprotease GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 985121..986155 GB:FROM 985121 GB:TO 986155 GB:DIRECTION + GB:PRODUCT putative glycoprotease GB:PROTEIN_ID BAD55729.1 LENGTH 344 SQ:AASEQ MGIESSCDETGVGIVRWHPDGTCELLADEVASSVDQHARFGGVVPEIASRAHLEAIVPAMRRALSAAGIAKPDALAVTIGPGLAGALLVGVAAAKAYAAAWDVPFYALNHLGGHVAVDTLEHGPMPPCVALLVSGGHTHLLHVTDLAAPIVELGSTVDDAAGEAFDKVARLLGLGFPGGPALDAAARDGDPHAIAFPRGMTGPRDPRYDFSFSGLKTAVARHVEAAQRAGVAIADLPIPDIAASFQEAVADVLTMKAVRAAQDMGVDTLVLGGGATANSRIRSLAEERCAAAGLTLRVPKPRLCTDNGVMIAALGAHVIAGGARPSPLTVASDPGLPVSVSQIA GT:EXON 1|1-344:0| SW:ID GCP_NOCFA SW:DE RecName: Full=Probable O-sialoglycoprotein endopeptidase; Short=Glycoprotease; EC=3.4.24.57; SW:GN Name=gcp; OrderedLocusNames=NFA_8840; SW:KW Complete proteome; Hydrolase; Metal-binding; Metalloprotease;Protease; Zinc. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->344|GCP_NOCFA|e-166|100.0|344/344| GO:SWS:NREP 4 GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0008237|"GO:metallopeptidase activity"|Metalloprotease| GO:SWS GO:0008233|"GO:peptidase activity"|Protease| PROS 95->115|PS01016|GLYCOPROTEASE|PDOC00779| TM:NTM 1 TM:REGION 75->97| SEG 82->100|glagallvgvaaakayaaa| SEG 171->186|llglgfpggpaldaaa| SEG 232->243|aiadlpipdiaa| BL:PDB:NREP 1 BL:PDB:REP 1->322|2ivnA|3e-21|35.7|294/325| RP:PDB:NREP 1 RP:PDB:REP 101->321|1bwfY|2e-15|16.3|209/494| RP:PFM:NREP 1 RP:PFM:REP 46->313|PF00814|4e-38|43.9|255/260|Peptidase_M22| HM:PFM:NREP 1 HM:PFM:REP 24->312|PF00814|3.8e-89|52.5|265/268|Peptidase_M22| GO:PFM:NREP 2 GO:PFM GO:0004222|"GO:metalloendopeptidase activity"|PF00814|IPR000905| GO:PFM GO:0006508|"GO:proteolysis"|PF00814|IPR000905| RP:SCP:NREP 2 RP:SCP:REP 1->123|1okjA1|5e-11|17.6|102/106|c.55.1.9| RP:SCP:REP 105->314|2i7nA2|1e-25|12.0|192/212|c.55.1.14| HM:SCP:REP 1->319|1huxA_|3.1e-28|34.7|251/0|c.55.1.5|1/1|Actin-like ATPase domain| OP:NHOMO 1221 OP:NHOMOORG 1112 OP:PATTERN --11-------------1--1--111111111111111111111111111111111111111111--- 1111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111--11111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111211111111111111111111111112111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111122111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111-1111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111-11111111111111111111111111111111 ---1111---1-11111--1111---111----11-122212211---121111-21211-112112111211211211121121112--111211---1-21212-12-31222212-1112233121382-2-111121-2221211222121112221-21212223112222-22F122121113-322142222 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 339 STR:RPRED 98.5 SQ:SECSTR EEEEcccccEEEEEEE##cHHHHTccGGGccccccTTcEEEEEEcccccEEEEEcccccHHHHHHHHTccGGHHHHHTcccccccEEEEEccccEEEEEEEcccEEEccccEEHHHHHHHHTTcccTTcEEEEEcccEEEEEEEEcTcccccccccEEEEEEcTTccEEEEEEEEEcccHHHHHHHHHTTccccHHHHHccccTTcEEEccTTcccTTTccTTcccEEEccccTTccHHHHHHHHHHHHHHHHHHHHHHHHHTccccEEEEEcGGGGcHHHHHHHHHHHHHHTcEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc### DISOP:02AL 342-344| PSIPRED cccccccHHHEEEEEEccccccccEEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccccccHHHHHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHHccccccEEEEEEEcccEEEEEEEccccEEEEEccccccHHHHHHHHHHHHHccccccHHHHHHHHHHccccccccccccccccccccEEEcHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHHHHcccEEEEEcHHHcccHHHHHHHHHHHHHHcccccccccccccccccccccccc //