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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55730.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  54/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.55.1
:513 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   98->287 2v7yA PDBj 1e-06 33.2 %
:RPS:PDB   95->315 1e4gT PDBj 7e-18 15.5 %
:RPS:SCOP  143->310 1jceA2  c.55.1.1 * 9e-18 25.8 %
:HMM:SCOP  137->313 1bupA2 c.55.1.1 * 3e-23 28.8 %
:RPS:PFM   85->309 PF00012 * HSP70 8e-10 28.9 %
:HMM:PFM   120->314 PF00012 * HSP70 5e-16 30.9 191/602  
:BLT:SWISS 98->310 HSCA_RALEJ 2e-13 30.8 %
:PROS 384->395|PS00178|AA_TRNA_LIGASE_I
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55730.1 GT:GENE BAD55730.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(986171..987712) GB:FROM 986171 GB:TO 987712 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55730.1 LENGTH 513 SQ:AASEQ MRTSLGISAGNEVVCSALVATAPNGAQSFDYRVVSADAAHSDIGDLVASSIDLMTTQLPARQVPHDVAWPAHPIGVGGEGGLGLQAAASKPPTSVAVAYRSREQAQVIRSATGRQRELELVHEATAALTYLRHTGLTDRYGTVAVVDLGATGLSVSVAEQADGTLLHTQRTHAISGNAIDDLIYHHLVDLHFARRGTRPNRAMLVNRGRAAKEHLSIAPAVTIDHVAGQPLKLTRSDFEVLIADLLADTAAYVSGAFARSPRAPEAVAVIGGGANIPAVVETLRRSLDVPVLTVDDPEAVIAKGAALVADAAQPATLPVGAMGAESSVSTFTKVAGTLVGAVVVVGLIIGYGVKTLAPTADDEVSPAGTTSGTRLPGAPVAVVPTTAPAPTAGGITTLAPPTSAAPTTTERTGVPSTTGSPVAPTTAPSTTPTLRPDPNLPPIPFPELLGPLLDRNAPQEQNSEPPLSEQPDAGSPPVTTSPSTTAPTPTQAPAQSRVPFPRAGSGSASGNTE GT:EXON 1|1-513:0| BL:SWS:NREP 1 BL:SWS:REP 98->310|HSCA_RALEJ|2e-13|30.8|211/621| PROS 384->395|PS00178|AA_TRNA_LIGASE_I|PDOC00161| TM:NTM 1 TM:REGION 334->356| SEG 75->84|gvggegglgl| SEG 332->354|tkvagtlvgavvvvgliigygvk| SEG 376->409|pgapvavvpttapaptaggittlapptsaapttt| SEG 414->433|vpsttgspvapttapsttpt| SEG 475->496|sppvttspsttaptptqapaqs| BL:PDB:NREP 1 BL:PDB:REP 98->287|2v7yA|1e-06|33.2|184/504| RP:PDB:NREP 1 RP:PDB:REP 95->315|1e4gT|7e-18|15.5|207/375| RP:PFM:NREP 1 RP:PFM:REP 85->309|PF00012|8e-10|28.9|225/488|HSP70| HM:PFM:NREP 1 HM:PFM:REP 120->314|PF00012|5e-16|30.9|191/602|HSP70| RP:SCP:NREP 1 RP:SCP:REP 143->310|1jceA2|9e-18|25.8|163/196|c.55.1.1| HM:SCP:REP 137->313|1bupA2|3e-23|28.8|177/193|c.55.1.1|1/1|Actin-like ATPase domain| OP:NHOMO 69 OP:NHOMOORG 54 OP:PATTERN -------------------------------------------------------------------- --------------21111-11--1311111-12222245----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-1-----------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------1111----1--------------11------------------------------------------------------------------------------------1-------1-----11---1-1--------------1-------------1--------------------------------1---1---1-11-1---111-------1-----11-------------------------------------------1------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 323 STR:RPRED 63.0 SQ:SECSTR ccccEEEEEcccEEEEEEEEEcccccccEEcccccEEccHHHHHHHHHHHHHHHEEHHTTEEEEEEEEEEEEETTTEEEcccTTcEEcEEEEEEEEEEEHHHHHHHHHHHTTccccEEEEEEHHHHHHHHHccHHHHHHcEEEEEEEcccccEEEEEEETTEEEEEEEEcEcccccHHHHHHHHHHccccHHHHHHHHHHHccHHHHHHHcccTTccccEEEEEcTTccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTcccccEEEEcGGGGcTTHHHHHHHHHcccEEEcccTTccccccccccccTTcGGEEcccccc############################################################################################################################################################################################## DISOP:02AL 1-7, 355-425, 435-513| PSIPRED ccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcHHHHccccccccccEEEEEcccccHHHHHHHHHHHHccccEEEEcHHHHHHHHHHHccccccccEEEEEEEcccEEEEEEEEEcccEEEEccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccEEEEccccccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHccccHHEEEEEccccHHHHHHHHHHHHHcccccccccHHHEEEcccEEEEccccccccccHHcccccccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc //