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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55747.1
DDBJ      :             putative two-component system sensor kinase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  36/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.122.1
:389 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   181->290 3ehfB PDBj 9e-07 20.9 %
:RPS:PDB   273->384 2akpA PDBj 3e-04 12.5 %
:RPS:SCOP  272->361 1ys3A1  d.122.1.3 * 7e-05 23.3 %
:HMM:SCOP  241->361 1gkzA2 d.122.1.4 * 2.2e-12 22.3 %
:HMM:PFM   277->361 PF02518 * HATPase_c 6.3e-11 24.7 85/111  
:HMM:PFM   173->200 PF07730 * HisKA_3 1.3e-05 42.9 28/68  
:HMM:PFM   101->155 PF04156 * IncA 1.3e-05 36.4 55/191  
:HMM:PFM   2->25 PF04024 * PspC 0.00011 54.2 24/61  
:BLT:SWISS 181->360 NREB_STAAR 2e-04 29.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55747.1 GT:GENE BAD55747.1 GT:PRODUCT putative two-component system sensor kinase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1004147..1005316 GB:FROM 1004147 GB:TO 1005316 GB:DIRECTION + GB:PRODUCT putative two-component system sensor kinase GB:PROTEIN_ID BAD55747.1 LENGTH 389 SQ:AASEQ MAFVLLSALAGAGIIAYGMLWVFTPGGVDTAEPSGTERRQAIGLAMLGLGLAIAVSWAMNATVAAKVIVPIVVVAVGAALVWREYDTDGPRSLLGLPARPSVVTWARIVTGATLVVLGLGVLVLARIDLGSLGSALIAVVVTLAGAGLLTVPLWLRMMGALNAERAARIRNEEREEIASHLHDSVLQTLALIQRQADDPHEVMRLARSQERELRRWLFDDSGPAHSSLAAALRTIAGEVEDQHGVKVTPVTVGDVTMDVDDSGFGLPKEHFTALLGAAREAMVNAAKHAGVPTVDLFAEVEPHQVSVFVRDRGAGFDPAAVPQDRQGLAKSIRGRIERRGGRVEILSTPGRGTEVRIHMPRSDAAGLDCAGEPDEDATERTREPAGRAD GT:EXON 1|1-389:0| BL:SWS:NREP 1 BL:SWS:REP 181->360|NREB_STAAR|2e-04|29.5|166/344| TM:NTM 4 TM:REGION 3->25| TM:REGION 51->73| TM:REGION 103->125| TM:REGION 135->157| SEG 5->20|llsalagagiiaygml| SEG 41->54|aiglamlglglaia| SEG 61->81|atvaakvivpivvvavgaalv| SEG 109->125|vtgatlvvlglgvlvla| SEG 162->178|naeraarirneereeia| SEG 247->261|vtpvtvgdvtmdvdd| SEG 332->345|irgrierrggrvei| RP:PDB:NREP 2 RP:PDB:REP 181->290|3ehfB|9e-07|20.9|91/101| RP:PDB:REP 273->384|2akpA|3e-04|12.5|112/184| HM:PFM:NREP 4 HM:PFM:REP 277->361|PF02518|6.3e-11|24.7|85/111|HATPase_c| HM:PFM:REP 173->200|PF07730|1.3e-05|42.9|28/68|HisKA_3| HM:PFM:REP 101->155|PF04156|1.3e-05|36.4|55/191|IncA| HM:PFM:REP 2->25|PF04024|0.00011|54.2|24/61|PspC| RP:SCP:NREP 1 RP:SCP:REP 272->361|1ys3A1|7e-05|23.3|90/137|d.122.1.3| HM:SCP:REP 241->361|1gkzA2|2.2e-12|22.3|121/193|d.122.1.4|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 37 OP:NHOMOORG 36 OP:PATTERN -------------------------------------------------------------------- ----111111---11---------------------1211-----1--1---111--1--111-11111111111111-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 206 STR:RPRED 53.0 SQ:SECSTR ##################################################################################################################################################################################HHHHHHHHHHHHHHHHHHHcHHHHHHHTTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHTTcEEcccccHccccccccHHHHHHHHHHHHHHcccccccEEEEEEEEcccEEEEEEEEccccccHHHHccTTcccHHHHHHHHHHTTcEEEEEccccEEEEEEEcTTcccEEEEEEcccccEEEEcccccc##### DISOP:02AL 161-174, 199-204, 206-208, 318-326, 362-389| PSIPRED cHHHHHHHHHHHHHHHcccHHEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHcccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEccEEEEEEEEcccccccccccccccHHHHHHHHHHHHHccEEEEEEcccccEEEEEEEEcccccccccccccccccccHHHccccccc //