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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55748.1
DDBJ      :             putative two-component system response regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  645/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:211 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->210 1rnlA PDBj 9e-18 27.6 %
:RPS:PDB   1->210 3c3wA PDBj 3e-22 30.2 %
:RPS:SCOP  1->114 1a0oA  c.23.1.1 * 3e-15 27.7 %
:RPS:SCOP  154->210 1a04A1  a.4.6.2 * 3e-16 35.1 %
:HMM:SCOP  1->123 1k66A_ c.23.1.1 * 1.1e-23 30.1 %
:HMM:SCOP  129->210 1p4wA_ a.4.6.2 * 3e-22 45.1 %
:RPS:PFM   47->112 PF00072 * Response_reg 2e-07 41.5 %
:RPS:PFM   154->205 PF00196 * GerE 3e-10 61.5 %
:HMM:PFM   3->109 PF00072 * Response_reg 1e-20 30.2 106/112  
:HMM:PFM   149->205 PF00196 * GerE 1.6e-20 52.6 57/58  
:BLT:SWISS 1->210 NREC_STACT 2e-26 30.5 %
:PROS 165->192|PS00622|HTH_LUXR_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55748.1 GT:GENE BAD55748.1 GT:PRODUCT putative two-component system response regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1005414..1006049 GB:FROM 1005414 GB:TO 1006049 GB:DIRECTION + GB:PRODUCT putative two-component system response regulator GB:PROTEIN_ID BAD55748.1 LENGTH 211 SQ:AASEQ MRVFLVDDHAVFRSGVRAELSREADLEVVGEAGGVAEAIAGIKATEPDVVLLDVHMPDGGGVAVLSGIEDGPVCLALSVSDAAEDVIAVIRAGARGYVTKTISGAELADGIRRVAGGDAVFSPRLAGFVLDSFTGRSPVPEPPLDPELDSLTPRELEVLRLLARGYTYREIAETLFISVKTVETHASNVLRKTQQSNRNALTRWAHRRRID GT:EXON 1|1-211:0| BL:SWS:NREP 1 BL:SWS:REP 1->210|NREC_STACT|2e-26|30.5|210/217| PROS 165->192|PS00622|HTH_LUXR_1|PDOC00542| SEG 27->42|evvgeaggvaeaiagi| SEG 137->153|spvpeppldpeldsltp| BL:PDB:NREP 1 BL:PDB:REP 3->210|1rnlA|9e-18|27.6|192/200| RP:PDB:NREP 1 RP:PDB:REP 1->210|3c3wA|3e-22|30.2|205/211| RP:PFM:NREP 2 RP:PFM:REP 47->112|PF00072|2e-07|41.5|65/111|Response_reg| RP:PFM:REP 154->205|PF00196|3e-10|61.5|52/57|GerE| HM:PFM:NREP 2 HM:PFM:REP 3->109|PF00072|1e-20|30.2|106/112|Response_reg| HM:PFM:REP 149->205|PF00196|1.6e-20|52.6|57/58|GerE| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0003700|"GO:transcription factor activity"|PF00196|IPR000792| GO:PFM GO:0005622|"GO:intracellular"|PF00196|IPR000792| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00196|IPR000792| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00196|IPR000792| RP:SCP:NREP 2 RP:SCP:REP 1->114|1a0oA|3e-15|27.7|112/128|c.23.1.1| RP:SCP:REP 154->210|1a04A1|3e-16|35.1|57/67|a.4.6.2| HM:SCP:REP 1->123|1k66A_|1.1e-23|30.1|123/149|c.23.1.1|1/1|CheY-like| HM:SCP:REP 129->210|1p4wA_|3e-22|45.1|82/0|a.4.6.2|1/1|C-terminal effector domain of the bipartite response regulators| OP:NHOMO 2406 OP:NHOMOORG 648 OP:PATTERN -------------------------------------------------------------------- 67B3T64533331262211-14--491111137666BHFF496NBF654865676254--67F5QALNUO92222212-33-7-----------11---3-7123E4833--------------------------99999657E6822633411--------34-C5461------------36522--24474444456526445547577374762424512222222C7333333333333333333321---22-1--1--1-2112--1-11111112122221111222121111111111111112111111112151611111221-1-11------4-1--A111-74112124-21111---6-12111------4A-4--12133311111111111-32124442-32-311121233322---1-11----1112-----------1-621-------------------------------21--3211153474445553665C6667266757BCB--4447A5345665534527826211111111-1355611511162-42111-2-521432433332341------------------------1--4411223-3114323223534412355244----322------63333635664543355-6555445545645455444333443325455555555355555455544341-555555455555--232322211111151211111211111-11222222222122276674766645454665----------2334344442434454657543341111111-112222--------1-------------------------------------3F- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2--1-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 210 STR:RPRED 99.5 SQ:SECSTR EEEEEEcccHHHHHHHHHHHHTcTTEEEEEEEccHHHHHHHHHHHcccEEEEccEETTEEHHHHHHHHcTTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHGGGccHHHHHHHHHHHHHHHHHHHHHHccTTTTccHHHHHHHHHHHTTccHHHHHHHHTccHHHHHHHHHHHHHHTTcccccHHHHHHHHHTT# DISOP:02AL 131-149| PSIPRED cEEEEEcccHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHccccEEEEEEcccHHHHHHHHHccccEEEcccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHHccc //