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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55752.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  13/68 : Bacteria  198/915 : Eukaryota  13/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:249 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->128 1a88A PDBj 2e-15 37.5 %
:RPS:PDB   11->249 3e3aB PDBj 1e-27 22.8 %
:RPS:SCOP  4->247 1a7uA  c.69.1.12 * 2e-24 25.1 %
:HMM:SCOP  4->247 1q0rA_ c.69.1.28 * 3.2e-52 34.0 %
:RPS:PFM   55->125 PF00561 * Abhydrolase_1 3e-09 46.5 %
:HMM:PFM   54->161 PF00561 * Abhydrolase_1 1.8e-19 36.4 88/231  
:HMM:PFM   13->84 PF12146 * Hydrolase_4 6.2e-12 31.9 72/79  
:BLT:SWISS 9->128 PRXC_STRLI 7e-15 37.5 %
:PROS 93->102|PS00120|LIPASE_SER
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55752.1 GT:GENE BAD55752.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1009788..1010537 GB:FROM 1009788 GB:TO 1010537 GB:DIRECTION + GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD55752.1 LENGTH 249 SQ:AASEQ MNSTFAHLSSHGVRIAYRDSGPADGVPVLLVHGMGGDGHTWDRFARRLLRDGRRVIVPDLRGHGRSSRAATYGFDEFGADLLRLCEHLGLDGVDLVGHSLGGYAVSCVAQERPALVRKLVIEECPLPLRSGDEELSLTRRFPTVPELWHAASSLVRHPRAVWAFDRSMTRVALEQFRKPNPQWWERLSEITAPTLVLRGGPGGMVDPEKLTVLTAAVADCTVTAFTCGHSIHRDRYREFEAAVLPFLTA GT:EXON 1|1-249:0| BL:SWS:NREP 1 BL:SWS:REP 9->128|PRXC_STRLI|7e-15|37.5|120/276| PROS 93->102|PS00120|LIPASE_SER|PDOC00110| SEG 42->54|drfarrllrdgrr| BL:PDB:NREP 1 BL:PDB:REP 9->128|1a88A|2e-15|37.5|120/275| RP:PDB:NREP 1 RP:PDB:REP 11->249|3e3aB|1e-27|22.8|237/275| RP:PFM:NREP 1 RP:PFM:REP 55->125|PF00561|3e-09|46.5|71/211|Abhydrolase_1| HM:PFM:NREP 2 HM:PFM:REP 54->161|PF00561|1.8e-19|36.4|88/231|Abhydrolase_1| HM:PFM:REP 13->84|PF12146|6.2e-12|31.9|72/79|Hydrolase_4| RP:SCP:NREP 1 RP:SCP:REP 4->247|1a7uA|2e-24|25.1|239/277|c.69.1.12| HM:SCP:REP 4->247|1q0rA_|3.2e-52|34.0|244/297|c.69.1.28|1/1|alpha/beta-Hydrolases| OP:NHOMO 416 OP:NHOMOORG 224 OP:PATTERN --------111111-1-------11--11--------------1----------------------1- -1--2------1--23222-24--3333333242222585-1-31-------21-1----212--134331-----------1------------------21----111---------------1--1--1---122211---2---11--1----------2-------------------121-------1-----1--1----------------------------22-------------------------------------------------------------------------------------------------------------------------2---------1--------1-1111------31224--122341111111111-1-43143223124-244-2412324352-----133331-2--------1211------------------------------------1-122211-552241------21------121--1---------1-----11-----21--------------1-211---------------121--11-143-1---------------------------------1---------------------------2--------1------------------------------------111-----------------------------------------------------------1--------------1----------11-22222422122361331-------------------------1--------------1-------------------------------------------------------- -----------------------1-------------------------1------1------------------------------------------------1-13-1---------------------------------------------------11-1--------------------11-------1--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 249 STR:RPRED 100.0 SQ:SECSTR cccEEEEEEEcccEEEEEEEcccccEEEEEEccTTccGGGGTTTHHHHHHHTTEEEEEccTTcGGGTTcccccHHHHHHHHHHHHHHTTcccEEEEEETHHHHHHHHHHHHcGGGEEEEEEEcccccccHHHHHHHHHHTTccccHHHHHHHHHHHHccHHHHTcHHHHHHHHHHHHHcccccGGGGGGccccEEEEEETTcccccHHHHHHHHHHcTTEEEEEETccTTHHHHcHHHHHHHHHHHHHH DISOP:02AL 1-2| PSIPRED cccEEEEEEEccEEEEEEEEccccccEEEEEccccccHHHHHHHHHHHHHcccEEEEEcccccccccccccccHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHHHHcHHHHcEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHccccEEEEEcccccHHHHcHHHHHHHHHHHHcc //