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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55758.1
DDBJ      :             putative short chain dehydrogenase
Swiss-Prot:             

Homologs  Archaea  35/68 : Bacteria  722/915 : Eukaryota  183/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:317 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   40->203 1xr3B PDBj 2e-18 34.0 %
:RPS:PDB   2->201 1dohB PDBj 2e-27 14.7 %
:RPS:SCOP  9->235 1yb1A  c.2.1.2 * 3e-25 25.9 %
:HMM:SCOP  9->225 1zemA1 c.2.1.2 * 2.7e-65 39.5 %
:RPS:PFM   40->181 PF00106 * adh_short 4e-19 39.3 %
:HMM:PFM   14->180 PF00106 * adh_short 2.4e-34 27.3 161/167  
:BLT:SWISS 40->271 ACR1_ACIAD 1e-55 49.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55758.1 GT:GENE BAD55758.1 GT:PRODUCT putative short chain dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1015036..1015989) GB:FROM 1015036 GB:TO 1015989 GB:DIRECTION - GB:PRODUCT putative short chain dehydrogenase GB:PROTEIN_ID BAD55758.1 LENGTH 317 SQ:AASEQ MAPASDHGRDLTGKHVLITGASSGIGRAAAVAVARKGATVFLLARRGEELTAVVEEIRAAGGQAHGYQCDITESESVDHTIKAILDEHDHVDMLVNNAGRSIRRAIHRSTDRLHDYERTMAVNYFGALRVTFALLPQMRARKSGHIVQISSAGVQAATPRFSAYLASKAALDKFTEVAAVETMADGVTFTTIHMPLVRTPMIAPSGRQGRAESPEWAAALIVRALVERPKRIDVPLGTIAEFGALFTPKFRDRVLHRYYRALPDSPAAKGEINSAGANGAHLPAPTPRPAPSGPSTARRLTGTALRRAARLVPGVYW GT:EXON 1|1-317:0| BL:SWS:NREP 1 BL:SWS:REP 40->271|ACR1_ACIAD|1e-55|49.1|232/303| SEG 18->39|itgassgigraaavavarkgat| SEG 283->311|paptprpapsgpstarrltgtalrraarl| BL:PDB:NREP 1 BL:PDB:REP 40->203|1xr3B|2e-18|34.0|162/254| RP:PDB:NREP 1 RP:PDB:REP 2->201|1dohB|2e-27|14.7|197/271| RP:PFM:NREP 1 RP:PFM:REP 40->181|PF00106|4e-19|39.3|140/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 14->180|PF00106|2.4e-34|27.3|161/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 9->235|1yb1A|3e-25|25.9|224/243|c.2.1.2| HM:SCP:REP 9->225|1zemA1|2.7e-65|39.5|215/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 4559 OP:NHOMOORG 940 OP:PATTERN --1---1211111112-3---1-15333332511---------1-113--422---------1-1-44 9AF1I-1---1-22NMJEE-EK33GUEEEEEGOOSPCEVI1A4K9215263-2231-3--567-75ABC56--------111B1----23241211---46D467W2B36----------1111-222273122428AAA911165G5BA54366222214431322B8L4-211111111216322221-84888888589869777763553666556487643222324E1222221111222115334451212313---333322322-42433434244411-222222222222211222322222222---222321232111----21212221-1-211-14311-2211111-23--111-1427F445-2-1-C2G572125376432432343444-6636487D7BA-GBB8C8AKKKJD8C64285654454473333333333332-73111---------1-11--1--1--1----24CJ314442CLFFLOI65454HHIG777718QCQ6GE713DC95533256B8CA282-23222--------149514F5511121-1---2-4214-1322823EG-2-1111-------1-------211-23221145471641-2121-233--14213113--21211------1657-423332311132-3332111332311333331574523221121122112111112A2322213--111111111111---3111113545-6A96---314-1111-11-66577353559489674477B44667413111-11111-212421221-2-3325666653332-1----15522------------1----2---------------------21--1-23113- 11--KE8-212-353759696779987333322333-43333332353BD8DHG464331121-213111-111311-1211111-21-AE854A4-11---3333-542WKMBCDA4275793FF4F4CXA-CCE7463835A847423711A6ACC99E87H8DA48C96ABB3231L2321433585745554451 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 278 STR:RPRED 87.7 SQ:SECSTR cccccGGGGccTTcEEEETTTTcHHHHHHHHHHHHTTcEEEEEEcccHHHHHHHHHHHHHTTccEEEEccTTcHHHHHHHHHHHHHHHccccEEEEcccccccccGGGccHHHHHHHHHHHHHTHHHHHHHHHHHHHccTTcEEEEEccGGGTccccccccHHHHHHHHHHHHHHHHHHHHHGGGTcEEEEEEEcccccHHHHHEcccGGTccHHHHHHTHHHHHHTHHHHHHHHHHHcccTHHHHHHHHTcTTcHHHHHHHccccHHHHHHcccTTc####################################### DISOP:02AL 1-10, 285-295| PSIPRED ccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHccEEEEEEcccccccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHccccccccccccccccccccccHHHHHHcHHHHHHHHHHccccc //