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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55768.1
DDBJ      :             putative isocitrate/isopropylmalate dehydrogenase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  168/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
c.77.1
:405 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   3->404 1lwdA PDBj e-161 68.6 %
:RPS:PDB   9->404 2cmjA PDBj e-106 67.7 %
:RPS:SCOP  1->405 1lwdA  c.77.1.1 * e-119 67.6 %
:HMM:SCOP  1->407 1lwdA_ c.77.1.1 * 1.3e-150 42.9 %
:RPS:PFM   15->396 PF00180 * Iso_dh 6e-25 36.8 %
:HMM:PFM   11->393 PF00180 * Iso_dh 3.9e-75 26.3 335/347  
:BLT:SWISS 3->404 IDH_MYCTU 0.0 79.9 %
:PROS 271->290|PS00470|IDH_IMDH

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55768.1 GT:GENE BAD55768.1 GT:PRODUCT putative isocitrate/isopropylmalate dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1024847..1026064 GB:FROM 1024847 GB:TO 1026064 GB:DIRECTION + GB:PRODUCT putative isocitrate/isopropylmalate dehydrogenase GB:PROTEIN_ID BAD55768.1 LENGTH 405 SQ:AASEQ MSKIKVEGTVVELDGDEMTRIIWQFIKDKLIHPYLDVNLEYYDLGIEYRDKTDDQVTVDAAEAIKRHGVGVKCATITPDEARVKEFGLKKMWRSPNGTIRNILGGTIFRAPIIISNIPRLVPGWTKPIIIGRHAFGDQYRATDFKVFQGGTVTLTFTPDDGSEPIVHEVVKMPEDGGVVMGMYNFKKSIEDFARASFNYGLQQNYPVYMSTKNTILKAYDGMFKDTFQEIFDTEFKSQFDAAGLTYEHRLIDDMVASSMKWEGGYVWACKNYDGDVQSDTVAQGFGSLGLMTSVLLTPDGKTCEAEAAHGTVTRHYRQHQQGKPTSTNPIASIFAWTRGLEHRGKLDNTPEVIGFAQTLEDVVIKTVEGGQMTKDLALLVGGDQGYLTTEEFLGALDTNLARALR GT:EXON 1|1-405:0| BL:SWS:NREP 1 BL:SWS:REP 3->404|IDH_MYCTU|0.0|79.9|402/409| PROS 271->290|PS00470|IDH_IMDH|PDOC00389| BL:PDB:NREP 1 BL:PDB:REP 3->404|1lwdA|e-161|68.6|401/413| RP:PDB:NREP 1 RP:PDB:REP 9->404|2cmjA|e-106|67.7|396/410| RP:PFM:NREP 1 RP:PFM:REP 15->396|PF00180|6e-25|36.8|315/338|Iso_dh| HM:PFM:NREP 1 HM:PFM:REP 11->393|PF00180|3.9e-75|26.3|335/347|Iso_dh| GO:PFM:NREP 4 GO:PFM GO:0000287|"GO:magnesium ion binding"|PF00180|IPR001804| GO:PFM GO:0016616|"GO:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"|PF00180|IPR001804| GO:PFM GO:0051287|"GO:NAD or NADH binding"|PF00180|IPR001804| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00180|IPR001804| RP:SCP:NREP 1 RP:SCP:REP 1->405|1lwdA|e-119|67.6|404/413|c.77.1.1| HM:SCP:REP 1->407|1lwdA_|1.3e-150|42.9|406/413|c.77.1.1|1/1|Isocitrate/Isopropylmalate dehydrogenase-like| OP:NHOMO 559 OP:NHOMOORG 358 OP:PATTERN -------------------------------------------------------------------- ----1----------1111-1---1-11111-----11111---11--1111-----1--11--111---11111111--111-------------------1--111------------------------------------1---1-----------------1---------------------11-1---------------------------------------------------------------------------------------------------------------------------------------1-------1-11-11------1--111--1111------111----1--111111111211111111111111111111111-1111111111111111-111111111111-1122221--11111111111-11-1-----------------------------11111------------------------------------------------------------------------1---1-------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111-----------------------------------------1-111--- 12--22--312-1111111111111111111111111111111111111111111111111112222212332222323322222211-12511112111111212-3-14383333222223243352BK2-224121242223123212222212222232222294262222111172121124451321122211 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 405 STR:RPRED 100.0 SQ:SECSTR ccccEEEEEEEEEEccHHHHHHHHHHHHHHTTTTEEEEEEEEEccHHHHHHTTTHHHHHHHHHHHHHcEEEEcccccccHHHHHHHTcccccccHHHHHHHHHccEEEEEEcccTTcccccTTccccEEEEEEcccGGGGcEEEEEcccEEEEEEEccccccccEEEEEEEEccccEEEEEccccHHHHHHHHHHHHHHHHHHTccEEEEEcTTTcTTHHHHHHHHHHHHHHHHTHHHHHHTTccEEEEEHHHHHHHHHHccccEEEEEcHHHHHHHHHHHHHHHTcTTcEEEEEEcTTcccEEEEccccccHHHHHHHHTTcccccccHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHcGGGcccHHHHHHHHHHHHHHHHH PSIPRED cccEEEcccEEEEccccccHHHHHHHHHHHcccccccEEEEEEccHHHHHHccccccHHHHHHHHHccEEEEccccccccccccccccccccccHHHHHHHHcccEEEEEEEEEcccccccccccccEEEEEcccccccccccEEcccccEEEEEEccccccccccEEEEEccccccEEEEEEEcHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHcccHHHcccccccccccEEEEcccccccccccccHHccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccccccHHHHHHHHHHHHHHHcc //