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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55769.1
DDBJ      :             putative dehydrogenase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  99/915 : Eukaryota  18/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:291 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->186 2uyyD PDBj 6e-09 25.3 %
:RPS:PDB   6->278 3ckyC PDBj 2e-17 17.4 %
:RPS:SCOP  6->119 1vpdA2  c.2.1.6 * 2e-11 28.1 %
:HMM:SCOP  4->158 2cvzA2 c.2.1.6 * 8.7e-22 31.4 %
:RPS:PFM   9->67 PF03446 * NAD_binding_2 2e-06 42.4 %
:HMM:PFM   5->145 PF03446 * NAD_binding_2 9.5e-17 26.2 141/163  
:BLT:SWISS 6->128 YFJR_BACSU 6e-10 27.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55769.1 GT:GENE BAD55769.1 GT:PRODUCT putative dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1026205..1027080) GB:FROM 1026205 GB:TO 1027080 GB:DIRECTION - GB:PRODUCT putative dehydrogenase GB:PROTEIN_ID BAD55769.1 LENGTH 291 SQ:AASEQ MSKTPVTVLGLGRIGAAVAEILVRAGHPTTVWNRTPGRAAHLDALGARRAPDPRTAVAAGRLIITVLADTPAATELLTPLADALAGRTVLNVATGRPDQAAELTTRLGGIPVLDAGIFGVPQTLGTPDTLLVYSGSPAANTEFGAVVALLGDARYVGSDPGSAARHDMAVLAGMYGLFGGFFQAVAMTRGERGGAVGFTETYLAPWLRALLDMLPTLAAEIDSGEYPVNYSDLAVNRRGLADIRATARAEGVTTDLLDPLQRIFDAEVAAGHGAASFTRAVAALTAAPVTS GT:EXON 1|1-291:0| BL:SWS:NREP 1 BL:SWS:REP 6->128|YFJR_BACSU|6e-10|27.6|123/286| BL:PDB:NREP 1 BL:PDB:REP 9->186|2uyyD|6e-09|25.3|174/291| RP:PDB:NREP 1 RP:PDB:REP 6->278|3ckyC|2e-17|17.4|265/296| RP:PFM:NREP 1 RP:PFM:REP 9->67|PF03446|2e-06|42.4|59/160|NAD_binding_2| HM:PFM:NREP 1 HM:PFM:REP 5->145|PF03446|9.5e-17|26.2|141/163|NAD_binding_2| GO:PFM:NREP 3 GO:PFM GO:0004616|"GO:phosphogluconate dehydrogenase (decarboxylating) activity"|PF03446|IPR006115| GO:PFM GO:0006098|"GO:pentose-phosphate shunt"|PF03446|IPR006115| GO:PFM GO:0055114|"GO:oxidation reduction"|PF03446|IPR006115| RP:SCP:NREP 1 RP:SCP:REP 6->119|1vpdA2|2e-11|28.1|114/161|c.2.1.6| HM:SCP:REP 4->158|2cvzA2|8.7e-22|31.4|153/0|c.2.1.6|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 151 OP:NHOMOORG 118 OP:PATTERN --------------1----------------------------------------------------- -1------------1----------4-------22231-4-223-2----------------1-1-5235------------1------------------------1----------------------------111------111--11---------1-------1-----------------1-----111111----1------------1---1--1-------1---------------------------------------------------------------------------------------------------------1--------------------------------------1--------1-1-1-------------------------1-1-----11----1-1221-----------1-----------------------------------------------------1----111111-------11------2-1-1---------------1-1---------1111111--------------------------11-111112------------------------------------------------------------------1-------1-------------------------------------1------------------------------------------------------------11-1------------------------11-1-2---1-----------------------------------------------------------------------------------------------------1-- -------------------11111-1111-----------------------11---11------------------------------------------------------1----------------------------------------------1----------------1-------2--1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 291 STR:RPRED 100.0 SQ:SECSTR HccccEEEEcccTTHHHHHHHHHHTTcEEEEEcccHHHHHHHHTTTcEEcccHHHHHHHccEEEEccccHHHHHHHHTcTTcHHTTcEEEEcccccHHHHHHHHHHHTTcEEEEccEEcHHHHHHHTcEEEEEEccHHHHHHHHHHHHHHEEEEEEEEcTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccHHHTcTTccHHccHHHHHHHccccccTccccccccHHHHHHHHHHHHHHHHHHHTcccHHHHHHHHHHHHHHHTTcTTccGGGGHHHHHHHHHHH DISOP:02AL 289-291| PSIPRED cccccEEEEEHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHcccccccHHHHHHcccEEEEEEcccHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHccEEEEccccccccccccccEEEEEcccHHHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHcccccc //