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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55782.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  119/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:339 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   36->98 PF03631 * Ribonuclease_BN 7e-08 40.3 %
:HMM:PFM   32->291 PF03631 * Ribonuclease_BN 1.8e-50 30.4 250/258  
:BLT:SWISS 2->289 YHJD_ECOLI 3e-27 29.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55782.1 GT:GENE BAD55782.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1039119..1040138 GB:FROM 1039119 GB:TO 1040138 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55782.1 LENGTH 339 SQ:AASEQ MQVIDNVKAGIERRVQARPWLDHLIRAGGQYQRQRGDYFAAGITYFTVLSLFPLLMVAFAIAGFVLAGNQDLFTELQNKIVENIPGEFGTQVNDLVDQAVESRGTVGVLGLITGLWTGLGWMANLRAALTEQWEGKHEDGNWFLTKLSDLGALVGLGVALVLSLGLSAVGSSDLGERVLDGLGLGGVPGARLLLTAVSILLALVASWAVFAWIIARLPREPVTLASAAKAALLAALIFEVFKFVASIYLRTVLRSPAGATFGSIIGLMVFSYVTYRIILFATAWAATAEENRKDAEVPTPAPAVIRPRVVDRGVSGGAGAAAFGAGALAALALTMFRRK GT:EXON 1|1-339:0| BL:SWS:NREP 1 BL:SWS:REP 2->289|YHJD_ECOLI|3e-27|29.3|287/337| TM:NTM 6 TM:REGION 43->65| TM:REGION 99->121| TM:REGION 149->171| TM:REGION 187->209| TM:REGION 226->248| TM:REGION 262->284| SEG 104->121|gtvgvlglitglwtglgw| SEG 147->209|lsdlgalvglgvalvlslglsavgssdlgervldglglggvpgarllltavsillalvaswav| SEG 224->236|lasaakaallaal| SEG 316->333|ggagaaafgagalaalal| RP:PFM:NREP 1 RP:PFM:REP 36->98|PF03631|7e-08|40.3|62/258|Ribonuclease_BN| HM:PFM:NREP 1 HM:PFM:REP 32->291|PF03631|1.8e-50|30.4|250/258|Ribonuclease_BN| GO:PFM:NREP 1 GO:PFM GO:0004540|"GO:ribonuclease activity"|PF03631|IPR004664| OP:NHOMO 119 OP:NHOMOORG 119 OP:PATTERN -------------------------------------------------------------------- -----1111111111-111-11111111111111111111-111--------------------111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111-111111111111-111111111111111111111111111111111111111111111111111--111111111111---------------------------------------------------------------------------1----------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 294-295| PSIPRED cccccccHHHHHHHHHcccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHccccEEEccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHcc //