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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55784.1
DDBJ      :             putative transporter
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  229/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:501 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  1->493 1pw4A_ f.38.1.1 * 4.8e-74 31.4 %
:RPS:PFM   249->379 PF07690 * MFS_1 1e-04 32.8 %
:HMM:PFM   16->407 PF07690 * MFS_1 6.1e-58 32.5 345/353  
:HMM:PFM   446->483 PF09719 * C_GCAxxG_C_C 0.00049 27.0 37/120  
:BLT:SWISS 25->401 TCMA_STRGA 1e-27 33.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55784.1 GT:GENE BAD55784.1 GT:PRODUCT putative transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1041785..1043290 GB:FROM 1041785 GB:TO 1043290 GB:DIRECTION + GB:PRODUCT putative transporter GB:PROTEIN_ID BAD55784.1 LENGTH 501 SQ:AASEQ MRTDSASRLLALGALSVATLTIGLDMTVLTVALPTLAMDLHADVGALQWFSTAYTLALAALMLPAGALGDRYGRKRLLLAALVVFGSASAACAFATSSGQLIAARVVLGAAAAAMIPLSMAVLPVLFPEPGERARALSIWVTAMGLGLPLGPVLGGWLIDNFWWGSVFLINVPMVVVAAIAVAALVPESRDHARRPLDLPGMGLSTTGMLALTYGLIRCGEQGWGDPLALACVAAGLVAGAALVAWQRRAAHPLIDPGLFRAPGFRWGAVFAVLISFALFGLFFTVPQYFQEVLGTDALGSGLRLLPMIGGLIVGARVGERLLPKAGVRAVLSGAMVVLALGLGWGALTGVDSPYWFTACWIALVGAGMGAGLPVAMSMALDDLDLDHAGVGTALLQAVRQAAGTLGVAALGAALATRYRSELGALNTAPYDAGVSAGVATAKATGDTAALAQVQSAFTGGMALMLWVCAAVAAAGVVLALAALPRRADAPVDASESTHVG GT:EXON 1|1-501:0| BL:SWS:NREP 1 BL:SWS:REP 25->401|TCMA_STRGA|1e-27|33.2|376/538| TM:NTM 14 TM:REGION 12->34| TM:REGION 50->72| TM:REGION 77->99| TM:REGION 104->126| TM:REGION 136->158| TM:REGION 165->187| TM:REGION 197->219| TM:REGION 225->247| TM:REGION 266->288| TM:REGION 298->320| TM:REGION 327->349| TM:REGION 367->389| TM:REGION 396->417| TM:REGION 462->484| SEG 5->18|sasrllalgalsva| SEG 56->68|lalaalmlpagal| SEG 87->98|sasaacafatss| SEG 101->122|liaarvvlgaaaaamiplsmav| SEG 145->158|glglplgpvlggwl| SEG 175->186|vvvaaiavaalv| SEG 228->245|lalacvaaglvagaalva| SEG 330->351|avlsgamvvlalglgwgaltgv| SEG 381->387|lddldld| SEG 402->417|aagtlgvaalgaalat| SEG 462->494|malmlwvcaavaaagvvlalaalprradapvda| RP:PFM:NREP 1 RP:PFM:REP 249->379|PF07690|1e-04|32.8|125/347|MFS_1| HM:PFM:NREP 2 HM:PFM:REP 16->407|PF07690|6.1e-58|32.5|345/353|MFS_1| HM:PFM:REP 446->483|PF09719|0.00049|27.0|37/120|C_GCAxxG_C_C| GO:PFM:NREP 1 GO:PFM GO:0055085|"GO:transmembrane transport"|PF07690|IPR011701| HM:SCP:REP 1->493|1pw4A_|4.8e-74|31.4|401/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 541 OP:NHOMOORG 231 OP:PATTERN -----------------------1-------------------2------------------------ ---2U1-1--112-4-311-17--54111115633499411A4E41--132-1111-1--26312-3JHA1-----------------11----------------------------------------------12211---31--------------------1-------------------1----4-23333333313233331-1111322--11---22222219-1-------------1---2211-22----111--11111--111------------------------------------------------1-------------------------------111---11----------1----------2-1----1-------------2----11----1--1---------11---------------22222222-11----1--------------------------------2--12223322431133331134333324226------222--1--1-2-31-1-------------------1------------------1----111-1--------------------------------------------------------------------------1-1--1--------------------------------2-231211--1-111111111113--------------------------------------1-------------------------1-3222-2-4---1-1---------------------------33--------1-----------11------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-5, 434-451, 486-501| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccc //