[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55798.1
DDBJ      :             putative adenosine deaminase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  383/915 : Eukaryota  140/199 : Viruses  0/175   --->[See Alignment]
c.1.9
:365 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   16->344 1w1iE PDBj 1e-27 31.3 %
:RPS:PDB   12->357 1a4mA PDBj 3e-21 24.1 %
:RPS:SCOP  12->353 2amxA1  c.1.9.1 * 7e-79 24.5 %
:HMM:SCOP  12->356 1a4mA_ c.1.9.1 * 3.5e-67 31.6 %
:RPS:PFM   16->353 PF00962 * A_deaminase 2e-55 42.3 %
:HMM:PFM   15->353 PF00962 * A_deaminase 3.2e-89 34.3 324/330  
:BLT:SWISS 7->365 ADD_MYCA9 e-149 73.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55798.1 GT:GENE BAD55798.1 GT:PRODUCT putative adenosine deaminase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1054190..1055287 GB:FROM 1054190 GB:TO 1055287 GB:DIRECTION + GB:PRODUCT putative adenosine deaminase GB:PROTEIN_ID BAD55798.1 LENGTH 365 SQ:AASEQ MTGPTPLTLASIRRAPKALLHDHLDGGLRPATVLELAAECGYDELPADTEAELAAWFREAADSGSLERYLETFAHTVAVMQTPEGLRRVARECVLDLAADGVVYAEVRYAPEQHLERGLSLDEVVEHTLAGFREGERAAAAAGQPIVVTCLLTAMRHAARSREIAELAVRWRDRGVGGFDIAGAEAGYPPTRHLDAFEYMRANSAHFTIHAGEAFGLPSIHEALAFCGCDRLGHGVRITDDIRVGDSVADAELGLVARYVRDKRIPLELCPSSNVQTGAVPSLDKHPFDLLARLRFRVTVNTDNRLMSDTSMSQEMHKLVQTFGYGWSDLERFTINAMKSAFIPFPERLRIIDDIIKPGYAVLIG GT:EXON 1|1-365:0| BL:SWS:NREP 1 BL:SWS:REP 7->365|ADD_MYCA9|e-149|73.7|358/362| SEG 130->143|agfregeraaaaag| BL:PDB:NREP 1 BL:PDB:REP 16->344|1w1iE|1e-27|31.3|310/352| RP:PDB:NREP 1 RP:PDB:REP 12->357|1a4mA|3e-21|24.1|332/349| RP:PFM:NREP 1 RP:PFM:REP 16->353|PF00962|2e-55|42.3|319/325|A_deaminase| HM:PFM:NREP 1 HM:PFM:REP 15->353|PF00962|3.2e-89|34.3|324/330|A_deaminase| GO:PFM:NREP 2 GO:PFM GO:0009168|"GO:purine ribonucleoside monophosphate biosynthetic process"|PF00962|IPR001365| GO:PFM GO:0019239|"GO:deaminase activity"|PF00962|IPR001365| RP:SCP:NREP 1 RP:SCP:REP 12->353|2amxA1|7e-79|24.5|323/357|c.1.9.1| HM:SCP:REP 12->356|1a4mA_|3.5e-67|31.6|326/0|c.1.9.1|1/1|Metallo-dependent hydrolases| OP:NHOMO 641 OP:NHOMOORG 524 OP:PATTERN -----------------1-------------------------------------------------- 111-2------11111111-3111111-111111111222-34321111212222111--22312155542-111---1-----------------------------1--------------------11-1-1-12211---1--1------------------------------------------1-----------------------------------------1-------------------11111111-111----111---1-1111111111-11-------------------------11111111----1-1111111-1--111-1111-----12-------------------1--1111--------------1-----------------------11--111111111111---111111111--1------------------------------------------------111111-11111111111111121111111111121--111111-1111122-1------1-----------1-11----------------1--1--111121------------1----------1---112212--212121111111111111111121-------------11111111111111111-111111111111111111111111221111-1111111111-111111111--1---1----111---------1111-1111------1--------2222221-1-131111111111111-111-1---11-1--1131111122111------------------111111-----------------------------------------------1- 11--11--1---11-1211111212111111111111------1111111112111-------1---111111-111--1111111------2-------11-111-112542242211-112111121131-112-11-11121-11--1--21121311-1222-112412131---111-321113211-11111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 341 STR:RPRED 93.4 SQ:SECSTR ###########cccccEEEEEEEGGGcccHHHHHHHHHHTHHTcccccccHHHHHHHHcccccccHHHHHTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTTEEEEEEEEccGGGccccccccGGGcccccccHHHHHHHHHHHHHHHHHHHccEEEEEGGHHHHHHHHHHTcTTTEEEEEEEccTTcTTGGGcHHHHHHHHHHTcEEEEEEcccccHHHHHHHHHTccccEEEEcGGGGGcHHHHHHH#####HHHHHHHHHTTcEEEEcHHHHHHcccccTTcccHHHHHHHTTccEEEccccTTTTTccHHHHHHHHHHTTTccHHHHHHHHHHHHHTccccHHHHHHHHHHHHH######## DISOP:02AL 1-3| PSIPRED cccccHHHHHHHHHccHHHHHccccccccHHHHHHHHHHccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccEEEEEEEcHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEcccccHHHHHHHHHHHHHHccEEEEEEcccccccccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHcccEEcccEEEcccHHHHHHHHHccHHHHHHHHHHccccEEEccHHHHHHHccccHHcccHHHHHHccccEEEEccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccHHHHHcc //