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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55802.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  262/915 : Eukaryota  0/199 : Viruses  1/175   --->[See Alignment]
d.3.1
:374 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   281->348 2k1gA PDBj 3e-07 42.6 %
:RPS:SCOP  276->371 2evrA2  d.3.1.16 * 1e-19 25.3 %
:HMM:SCOP  250->372 2evrA2 d.3.1.16 * 4.9e-32 40.2 %
:RPS:PFM   276->359 PF00877 * NLPC_P60 3e-14 53.0 %
:HMM:PFM   274->366 PF00877 * NLPC_P60 6.7e-21 42.4 92/105  
:HMM:PFM   32->98 PF06013 * WXG100 2.5e-08 23.9 67/86  
:BLT:SWISS 276->350 YDDH_BACSU 9e-16 44.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55802.1 GT:GENE BAD55802.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1057286..1058410) GB:FROM 1057286 GB:TO 1058410 GB:DIRECTION - GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD55802.1 LENGTH 374 SQ:AASEQ MIDINVLVKPLLDLLSSFGSGVLPSGGPSDALVSASTALEQLHQQGRASINQMNSAWDGVAADAATAKALRVQTSAATISDRGTEMATVVNQAAAQVETGQKDLNGIVQSFVNTATALGPTLATPQGLTVLVGSAIEHLNQGLAVVGRVRSELDTQTAAITQLTPPPSTPPVASLPGALAGGASSGLQGLMGMVSQAGSLATTMASTPLKQVSKAANTGTTPSSAAPSGQNPNSSTSTTATTDGVKITLPDGSVVEAPNEKAATAVQAAIGAVGTPYVWGGNDPGSGIDCSGLTKYAYGEAGVELPRLAQEQHIGHPQVSPGDLMPGDLAVWDGHVAMVIGNGQLVEAGDPVSISSIRTENMGMEFYGFYRPTA GT:EXON 1|1-374:0| BL:SWS:NREP 1 BL:SWS:REP 276->350|YDDH_BACSU|9e-16|44.0|75/329| SEG 56->69|awdgvaadaataka| SEG 114->125|tatalgptlatp| SEG 163->192|ltpppstppvaslpgalaggassglqglmg| SEG 234->242|sststtatt| SEG 262->275|aatavqaaigavgt| BL:PDB:NREP 1 BL:PDB:REP 281->348|2k1gA|3e-07|42.6|68/129| RP:PFM:NREP 1 RP:PFM:REP 276->359|PF00877|3e-14|53.0|83/100|NLPC_P60| HM:PFM:NREP 2 HM:PFM:REP 274->366|PF00877|6.7e-21|42.4|92/105|NLPC_P60| HM:PFM:REP 32->98|PF06013|2.5e-08|23.9|67/86|WXG100| RP:SCP:NREP 1 RP:SCP:REP 276->371|2evrA2|1e-19|25.3|95/148|d.3.1.16| HM:SCP:REP 250->372|2evrA2|4.9e-32|40.2|122/0|d.3.1.16|1/1|Cysteine proteinases| OP:NHOMO 496 OP:NHOMOORG 263 OP:PATTERN -------------------------------------------------------------------- ---1723333342322211-192243222224478944254129322-411113-11-11222135288951---111--21------------------------------------------------------11111---21-------------------------------------111-----3---1-11--1--1--111-11121---1111--2112111--1----------1-------3-11221-1-1--222221--111111------------111-11-1--------1-----11---2-1----5533345641511711111--2122--6--331-1---11-------------1--------------------------------1--------------------------1--1111------------------------------------------------------11111222222211111111111111221--11----1--122-21-1---------11111111----1----------------112111111------11-------------------------22---------------------------------------------------11--------1---1---111-1-----1--------------------------11-------------------------------1--1--------------------------1-----2211-22221222------------------------------------------------------------------------------------1------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 72 STR:RPRED 19.3 SQ:SECSTR ####################################################################################################################################################################################################################################################################################ccTTccccTTcccHHHHHHHHHHHTcccccccHHHHGGGcEEEcGGGccTTEEEEEEEEEEEEEETTEEEEE########################## DISOP:02AL 151-183, 214-261| PSIPRED cccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccHHHHHccHHHHHHccccccccccHHHHHHHHHcccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccHHHccccccccccccccccccccEEcccccccccccHHHHHHHHHHHHHccccEEEccccccccccHHHHHHHHHHHccccccccHHHHHHccccccHHHcccccEEEEccEEEEEEcccEEEEccccEEEEEccccHHHcccEEEEcccc //