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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55808.1
DDBJ      :             putative peptidase
Swiss-Prot:             

Homologs  Archaea  21/68 : Bacteria  231/915 : Eukaryota  102/199 : Viruses  0/175   --->[See Alignment]
c.56.5d.58.19
:414 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   173->336 3io1B PDBj 3e-08 30.4 %
:RPS:PDB   39->363 3bhxA PDBj 3e-18 9.0 %
:RPS:SCOP  39->210 1xmbA1  c.56.5.4 * 8e-26 25.9 %
:RPS:SCOP  191->290 1fnoA3  d.58.19.1 * 7e-15 14.4 %
:HMM:SCOP  25->398 2q43A1 c.56.5.4 * 1.7e-55 39.5 %
:HMM:PFM   187->279 PF07687 * M20_dimer 1.6e-10 20.7 92/109  
:HMM:PFM   85->162 PF03308 * ArgK 0.001 23.3 73/267  
:BLT:SWISS 41->355 P20D2_MOUSE 2e-60 48.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55808.1 GT:GENE BAD55808.1 GT:PRODUCT putative peptidase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1062817..1064061 GB:FROM 1062817 GB:TO 1064061 GB:DIRECTION + GB:PRODUCT putative peptidase GB:PROTEIN_ID BAD55808.1 LENGTH 414 SQ:AASEQ MPPPPPVPPSRDGARADAGARVDAAARADAAIGAAGPRLIALSHAIHAEPELAFAEHRSVAKTLEPLAERGFEITTGVAELPTAFRAVYGSGSLTVGLCAEYDALPEIGHACGHNIIAAASVGAGLGLAEVADALDLTVVVLGTPAEESGGGKVLMLERGVFDDIAMAMMVHPGPCDIAGARSLALADIAVRFHGREAHASAAPDQGRNAGDAVTVAQVALGLLRQHLKPGQQLHGIVSDGGIAPNIVPGHAELLYYLRAADSASLDDLMRRASACFEAGALATGCTHEIRTLAPTYTELTPDPGLLRVYREQIADLGRVPIAADLEAARPLGSTDMGNVTNVVPGIHPVIGIDAGGAVTHQPGFAAASVNASADRAVIDGARALARTAIAVARDEEHRGRLWQRLVRRQEDIR GT:EXON 1|1-414:0| BL:SWS:NREP 1 BL:SWS:REP 41->355|P20D2_MOUSE|2e-60|48.7|310/431| SEG 2->9|pppppvpp| SEG 11->36|rdgaradagarvdaaaradaaigaag| SEG 118->142|aaasvgaglglaevadaldltvvvl| SEG 366->378|aaasvnasadrav| SEG 382->394|aralartaiavar| BL:PDB:NREP 1 BL:PDB:REP 173->336|3io1B|3e-08|30.4|158/380| RP:PDB:NREP 1 RP:PDB:REP 39->363|3bhxA|3e-18|9.0|324/694| HM:PFM:NREP 2 HM:PFM:REP 187->279|PF07687|1.6e-10|20.7|92/109|M20_dimer| HM:PFM:REP 85->162|PF03308|0.001|23.3|73/267|ArgK| RP:SCP:NREP 2 RP:SCP:REP 39->210|1xmbA1|8e-26|25.9|170/273|c.56.5.4| RP:SCP:REP 191->290|1fnoA3|7e-15|14.4|97/113|d.58.19.1| HM:SCP:REP 25->398|2q43A1|1.7e-55|39.5|256/0|c.56.5.4|1/1|Zn-dependent exopeptidases| OP:NHOMO 561 OP:NHOMOORG 354 OP:PATTERN --------1111112-1-------111-11-1----------------------111----1111--- --2--2-1112---21111-31--1211111111111245---1112-----1112----11--1-2111------------1---------------------21----------------------1-----1------111----11--1--------------111-------------1---------12222222212222125-11-13221-2141-------2211111111111111111111---------------1-------1-1---------------------------------------------1--111-1111111-7--211114-1--1---11-----3-1-----1-1--1111-------112------------------2---1--1-1--1-2332--121-22------1-----------------11----1------------------------------1-1-1----2222223-----2211------411211---22-----12-1----------1-----------------------1------1--111------12-------------------------------------1------------------------------------31---111-1---11-11111--1-11-111111-34322-1-----------------311----1---------------------------------------------------------------------------------1------------------------------------------------------------------------------------1------ --------------1-12-22217574-------1-1111111---1124549522322222--1-------1----------------36-1233121--11426----82122-1111111131111131-111-1111111111111111111111----53--------45-------------3---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 329 STR:RPRED 79.5 SQ:SECSTR ####################################HHccGGGcccccccccccccccGGGTTcEEEEEcccEEEEEEEEEEEEEEccccEEEEEEEEEEEcccccccTTTHHHHHHHHHHHHHHHHHHHTTccccEEEEEEEEccGGGTcHHHHHTHHHHHHHEEEEEEcccccccccEEEEEEcGGGHHHHHHHHHcccccccTTcTTccHHHHHHHHccccccTTcccEEccccccTHHHHTTccEEEEEEEEcccGGGTTTccTTTTcTTccHHHHHHHTcTTHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHTTcHHHHHHTTcccHHHHHHHHHHHHHHHHcHH################################################# DISOP:02AL 1-4, 8-27, 410-414| PSIPRED ccccccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccEEEEccccccEEEEEEEcccccEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccccHHHHHHHHHHccccEEEEEEccccccccccEEEEEEEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEEEccccccEEccEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHccEEEEEEcccccccccccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHccEEEEEEEccccccccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccc //