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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55812.1
DDBJ      :             putative dihydrolipoamide dehydrogenase
Swiss-Prot:             

Homologs  Archaea  42/68 : Bacteria  861/915 : Eukaryota  192/199 : Viruses  0/175   --->[See Alignment]
c.3.1d.87.1
:469 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->463 1xdiA PDBj e-160 67.7 %
:RPS:PDB   4->466 1dxlA PDBj 2e-59 27.4 %
:RPS:SCOP  1->44,277->346 1xdiA1  c.3.1.5 * 5e-14 82.9 %
:RPS:SCOP  157->274 1bhyA2  c.3.1.5 * 1e-13 23.1 %
:RPS:SCOP  347->463 1xdiA2  d.87.1.1 * 3e-23 68.4 %
:HMM:SCOP  1->340 1f8rA1 c.3.1.2 * 4.6e-54 34.4 %
:HMM:SCOP  347->464 1xdiA2 d.87.1.1 * 3.1e-25 37.3 %
:RPS:PFM   4->315 PF07992 * Pyr_redox_2 5e-17 36.7 %
:RPS:PFM   350->458 PF02852 * Pyr_redox_dim 7e-13 34.9 %
:HMM:PFM   3->318 PF07992 * Pyr_redox_2 2e-42 39.5 190/202  
:HMM:PFM   350->458 PF02852 * Pyr_redox_dim 1.5e-24 40.4 109/110  
:BLT:SWISS 2->458 DLDH_HALVO 4e-55 33.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55812.1 GT:GENE BAD55812.1 GT:PRODUCT putative dihydrolipoamide dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1066080..1067489 GB:FROM 1066080 GB:TO 1067489 GB:DIRECTION + GB:PRODUCT putative dihydrolipoamide dehydrogenase GB:PROTEIN_ID BAD55812.1 LENGTH 469 SQ:AASEQ MTRIAIIGGGPAGYEAALVAAQHGAQVTLIDRDGIGGACVLWDCVPSKTFIASTGMRTDLRRARDLGITLDPSQAAVQLPEVNARVKALALAQSSDIRSKLLSAGVTLISGTASFTDPAPGRAPHRITVRPTGERAGERVIDAEVVLIATGASPRVLPGAEPDGERILTWRQLYDLRELPETLVVVGSGVTGAEFVSAYTELGVQVKLVSSRDRVLPGEDADAALVLEEALAERGVELVKHARADAVERTADGVVVKLSDGRTVTGTHALMTVGSTPNTGDLALDKVGIELDRGGYLRVDRVSRTAVSGIYAAGDCTGLLPLASVAAMQGRIAMYHALGEGVSPIRLKTVASAVFTRPEIATVGVSQTAIDNGEVPARTVMLPLNTNPRAKMSGLRRGFVKIFCRPATGVVIGGVVVAPIASELILPIALAVQNNLTVNDLAQTFSVYPSLTGSVTEAGRLLMRHDDLD GT:EXON 1|1-469:0| BL:SWS:NREP 1 BL:SWS:REP 2->458|DLDH_HALVO|4e-55|33.0|446/475| SEG 218->238|gedadaalvleealaergvel| SEG 409->417|gvviggvvv| BL:PDB:NREP 1 BL:PDB:REP 1->463|1xdiA|e-160|67.7|455/459| RP:PDB:NREP 1 RP:PDB:REP 4->466|1dxlA|2e-59|27.4|453/467| RP:PFM:NREP 2 RP:PFM:REP 4->315|PF07992|5e-17|36.7|267/275|Pyr_redox_2| RP:PFM:REP 350->458|PF02852|7e-13|34.9|109/110|Pyr_redox_dim| HM:PFM:NREP 2 HM:PFM:REP 3->318|PF07992|2e-42|39.5|190/202|Pyr_redox_2| HM:PFM:REP 350->458|PF02852|1.5e-24|40.4|109/110|Pyr_redox_dim| GO:PFM:NREP 5 GO:PFM GO:0005737|"GO:cytoplasm"|PF02852|IPR004099| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF02852|IPR004099| GO:PFM GO:0045454|"GO:cell redox homeostasis"|PF02852|IPR004099| GO:PFM GO:0050660|"GO:FAD binding"|PF02852|IPR004099| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02852|IPR004099| RP:SCP:NREP 3 RP:SCP:REP 1->44,277->346|1xdiA1|5e-14|82.9|114/227|c.3.1.5| RP:SCP:REP 157->274|1bhyA2|1e-13|23.1|117/125|c.3.1.5| RP:SCP:REP 347->463|1xdiA2|3e-23|68.4|117/118|d.87.1.1| HM:SCP:REP 1->340|1f8rA1|4.6e-54|34.4|299/371|c.3.1.2|1/1|FAD/NAD(P)-binding domain| HM:SCP:REP 347->464|1xdiA2|3.1e-25|37.3|118/0|d.87.1.1|1/1|FAD/NAD-linked reductases, dimerisation (C-terminal) domain| OP:NHOMO 3546 OP:NHOMOORG 1095 OP:PATTERN 221-115433333345-2212--14112-251-11--------22-21113322-------343---- 4444733344533394555-7611845555535444377634444535355246A24333447455644321222222--113121113331-31112222227333232111111111111113121212112122221211142434333312332222232223547322222222222232244111133444444342445434353353444232325444444454233333333333333385643231541212267332335454233353333335433444334433422222222222224333333332123--33333222311422--1121--13----42-31123112222123215533333333365343343333344444444445-3353553567435664669778773755555444445653333333353324443223222222211222222222222222221536725535667776864444663555553456648682245433356445452364311123333333346343222522322424222-3242443413333441211--------------------112563437754535622222242422322223341-1664511111143335334445455544-444445544445434344444433333444445444436444543333334314444444444441133111114454247552222222222222225444533454335667555545556443343444434333445333333334432232232222222223-443333--------1-211111-1-22111222121121---2111111121541 22--224-C55-2222212122222222222222211222222221223334332223222222122222212233323322222122-33222221111222424-2817233344212122134161Da3-6421211523423222221332433549A13211533724654353x33355655A2849676667 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 469 STR:RPRED 100.0 SQ:SECSTR HHEEEEEcccHHHHHHHHHHHHHTccEEEEEcccccccHHHHcHHHHHHHHHHHHHHHHHHHTHHHHTccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHTcEEEEccEEEEETTEEEEEcccEEEEcccccccEEEEccEEEEcccEEEcccTTcccccccEEcHHHHTTccccccEEEEccccHHHHHHHHHHHHHTcEEEEEcccccccTTccHHHHHHHHHHHHHccccEEccEEEEEEEcccccEEEEEcccEEEEEcEEEccccEEEccTTcccTTTTccccccccccccTTcccccTTEEEccTTccccccHHHHHHHHHHHHHHHTTcccccccTTcccEEEccccEEEEEEccHHHHHHTTccEEEEEEEGGGcHHHHHHcccccEEEEEEETTTccEEEEEEEETTHHHHHHHHHHHHHTTccHHHHHTcccccccTTHHHHHHHHHHHcccccc DISOP:02AL 469-470| PSIPRED ccEEEEEcccHHHHHHHHHHHHcccEEEEEEcccccEEEEEEcccccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEcccccccccEEEEEEEcccccEEEEEEcEEEEEcccEEccccccccccccEEEEHHHHcHHHcccEEEEEcccHHHHHHHHHHHHcccEEEEEEccccccccccHHHHHHHHHHHHHcccEEEEccEEEEEEEcccEEEEEEccccEEEEEEEEEEcccccccccccHHHcccEEcccccEEEccEEEcccccEEEEEEccccccccHHHHHHHHHHHHHHccccccccccccccEEEEccccEEEEEccHHHHHHccccEEEEEEEccccccEEcccccEEEEEEEEEcccccEEEEEEEEccHHHHHHHHHHHHHccccHHHHHccccccccHHHHHHHHHHHHHcccccc //