[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55823.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  92/915 : Eukaryota  78/199 : Viruses  0/175   --->[See Alignment]
c.3.1
:664 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   607->659 1mxtA PDBj 5e-04 39.6 %
:RPS:PDB   203->663 1cf3A PDBj 2e-17 17.2 %
:RPS:SCOP  227->432 1ju2A1  c.3.1.2 * 3e-07 19.1 %
:RPS:SCOP  565->664 1tzlA1  c.3.1.2 * 8e-14 23.4 %
:HMM:SCOP  170->663 1cf3A1 c.3.1.2 * 4.5e-51 29.6 %
:RPS:PFM   378->419 PF00732 * GMC_oxred_N 1e-05 54.8 %
:RPS:PFM   503->550 PF02219 * MTHFR 6e-04 35.4 %
:RPS:PFM   600->652 PF05199 * GMC_oxred_C 4e-07 47.2 %
:HMM:PFM   175->432 PF00732 * GMC_oxred_N 1.6e-49 36.8 250/298  
:HMM:PFM   514->653 PF05199 * GMC_oxred_C 1.4e-25 28.7 136/145  
:BLT:SWISS 218->663 Y492_MYCTU 7e-30 29.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55823.1 GT:GENE BAD55823.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1082488..1084482 GB:FROM 1082488 GB:TO 1084482 GB:DIRECTION + GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD55823.1 LENGTH 664 SQ:AASEQ MLRCHTTALESHPMELSAKQRAALELICDTFAPGDGLALPSATQLGVPDVMLRMLGRDPNEAAGKQLATLLGIWDTPLLGLLAGAGPRPFSRRSPTEREQLLLKLGASRLGVKRALFQALKQGSLLSYYVTPGPDGFNPLWKEMGYPGPPGQLAAAPRPALDPLRCTAPTTLDCDVVVVGSGAGGGTAAAVLAEAGLDVVVLERGDYYDDADFGNGELDALTRLYAPGPNATAEGQLTLVSGTCLGGGTVVNWSTSLRTPDSVRAEWASLGATQFAEDEFGAALDAVERRLSVTYDKSPISRRDSVLERGVRALGWDIGPLPRNVTDACDAGEECGRCGYGCRVGAKQSVTKTWLADAAARGARLVVGADVRRIVVRGGTAEGVVAVTDNGAELTVRAKAVVVSGGAIQTPALLRRSGLRNKNIGAHLRLHPASAVFGTFEEEVRPWEGGLQTRISRKHADLDGAGYGVIYETGPMHPGMLVGFMNWRGGAEHRRAMLDLAHTAAIGVITRDRDSGRVEVDKAGHPIVHYTISDRDRDHLHTGILGAASILEAAGAKKIFSGHQAGPVYQPGVRGSHAEFAAACQAAGYRPGRCGMAALHIMGSARMGGSRDTCALDPDGATWEVPNVVVADASCFPTSSGVNPMVSIEAIAYMNATRLAARLS GT:EXON 1|1-664:0| BL:SWS:NREP 1 BL:SWS:REP 218->663|Y492_MYCTU|7e-30|29.4|428/629| SEG 78->86|llgllagag| SEG 153->165|laaaprpaldplr| SEG 176->202|vvvvgsgagggtaaavlaeagldvvvl| SEG 332->345|geecgrcgygcrvg| SEG 355->373|ladaaargarlvvgadvrr| BL:PDB:NREP 1 BL:PDB:REP 607->659|1mxtA|5e-04|39.6|53/498| RP:PDB:NREP 1 RP:PDB:REP 203->663|1cf3A|2e-17|17.2|453/581| RP:PFM:NREP 3 RP:PFM:REP 378->419|PF00732|1e-05|54.8|42/296|GMC_oxred_N| RP:PFM:REP 503->550|PF02219|6e-04|35.4|48/284|MTHFR| RP:PFM:REP 600->652|PF05199|4e-07|47.2|53/140|GMC_oxred_C| HM:PFM:NREP 2 HM:PFM:REP 175->432|PF00732|1.6e-49|36.8|250/298|GMC_oxred_N| HM:PFM:REP 514->653|PF05199|1.4e-25|28.7|136/145|GMC_oxred_C| GO:PFM:NREP 6 GO:PFM GO:0016614|"GO:oxidoreductase activity, acting on CH-OH group of donors"|PF00732|IPR000172| GO:PFM GO:0050660|"GO:FAD binding"|PF00732|IPR000172| GO:PFM GO:0004489|"GO:methylenetetrahydrofolate reductase (NADPH) activity"|PF02219|IPR003171| GO:PFM GO:0006555|"GO:methionine metabolic process"|PF02219|IPR003171| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02219|IPR003171| GO:PFM GO:0016614|"GO:oxidoreductase activity, acting on CH-OH group of donors"|PF05199|IPR007867| RP:SCP:NREP 2 RP:SCP:REP 227->432|1ju2A1|3e-07|19.1|194/351|c.3.1.2| RP:SCP:REP 565->664|1tzlA1|8e-14|23.4|94/379|c.3.1.2| HM:SCP:REP 170->663|1cf3A1|4.5e-51|29.6|324/0|c.3.1.2|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 214 OP:NHOMOORG 171 OP:PATTERN ------------------------------1------------------------------------- 11-----------1---11-1---2-111112----1-----------------1----------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------1--1---1--------2----------------1-----------------------------------------------------------1--1-1-----221211111--111-11------1----121-1--1----11-----------1--1-1-------------------------3---------------------------------1------1111111111111111111---1-----------------------------------------------------------------------------------------------1----------2------------------------------11111111111111---------------------------------------------22--22------------------------------------------------- ----11--------111121111111111111111111121111111112122211111111-11----1--1-2------11111------1-------111352-----------------------------------------------------------------------------1233151441-----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 461 STR:RPRED 69.4 SQ:SECSTR ##########################################################################################################################################################################################################EcccccTTccHHHHcGGGTTTTTTccccTTTccccEEcccccTTGGGGTcccccccccHHHHHHHHTTccTTccHHHHHHHHHHHEEEcccccccGGGccccccEEEccccccccccTHHHHHHHHHHTTTccccccTTcccccEcHHHHHTGGGTTcTTEEEEEccEEEEEEEEcccccEEEEEEETTEEEEEEEEEEEEcccTTTHHHHHHHTTcccHHTTccccccEEEEEHHHHGGGHHHHHHHHHHcHHHHHHHHHHTTccccHHHHHHHHHHHHHHHHTTccEEEEEEEEcTTEEEEEEEEcccccccEEEEGGGccEEccTTccHHHHHHHHHHHHHHHHHHTcGGGGGTEEEEccccHHHHEEcGGGccTTccHHHHHHHGGGccEEccccccTTccccGGGTccccTTcccTTcccEEEccTTccccccccccHHHHHHHHHHHHHHHHHHH# DISOP:02AL 1-4, 156-164| PSIPRED ccEEEccHHccccccccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHcHHHHHHHHccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHEEccccccHHHHHHHccccccccccccccccccccccccccccEEEEEEEcccHHHHHHHHHHHHccccEEEEEcccccccccccccccHHHHHcccccccccccccEEEEcccEEccccHHHccEEccccHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccEEEEccEEEEEEEEccEEEEEEEEEcccEEEEEEEcEEEEEccccccHHHHHHcccccHHHHHHHHccccEEEEEEEccccccccccHHHHHHHHHHcccccccEEEEEccccccHHHHHHccccccHHHHHHHHHcccEEEEEEEEccccccEEEEccccccEEEccccHHHHHHHHHHHHHHHHHHHHccHHHHHccccccccccccccccHHHHHHHHHHHHHHcccccEEEEcccccccccccccccEEccccEEcccccEEEEccHHHcccccccHHHHHHHHHHHHHHHHHHHcc //