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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55833.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  180/915 : Eukaryota  13/199 : Viruses  0/175   --->[See Alignment]
c.19.1
:302 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  21->193 1oxwA  c.19.1.3 * 1e-15 16.3 %
:HMM:SCOP  16->221 1oxwA_ c.19.1.3 * 1.4e-31 29.4 %
:RPS:PFM   22->71 PF01734 * Patatin 5e-08 58.3 %
:HMM:PFM   22->192 PF01734 * Patatin 1.3e-26 30.8 169/204  
:BLT:SWISS 19->205 YJJU_ECOLI 6e-18 31.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55833.1 GT:GENE BAD55833.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1094481..1095389) GB:FROM 1094481 GB:TO 1095389 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55833.1 LENGTH 302 SQ:AASEQ MAEIIRGRSTSGSRADGHRLVLVIEGGGSRGVYSSGMVQGLEELGLSAVFDAVYGTSAGAINGAWLLCGRAVPGMRSWSNPDIMRAVIDPARLLRGGAAFDVRYLVHRVYDGVEPMDFDAILNHATTFHPIATDARTGNAVDLRPHIYDKRSLMRALRASANLPILAGGPILLDGVPYFDGGIAEPIPIHAAVRGGGTHFLVLRTRRADESRPPASRVHRLVGGGYLRRRAPGAYRAWLARPDQERAEDRLLADLGEKVWQIHPPPGSPTVDGTARDTGLLSRALELGRRAVHASLAPVTAS GT:EXON 1|1-302:0| BL:SWS:NREP 1 BL:SWS:REP 19->205|YJJU_ECOLI|6e-18|31.1|180/357| RP:PFM:NREP 1 RP:PFM:REP 22->71|PF01734|5e-08|58.3|48/182|Patatin| HM:PFM:NREP 1 HM:PFM:REP 22->192|PF01734|1.3e-26|30.8|169/204|Patatin| GO:PFM:NREP 1 GO:PFM GO:0006629|"GO:lipid metabolic process"|PF01734|IPR002641| RP:SCP:NREP 1 RP:SCP:REP 21->193|1oxwA|1e-15|16.3|166/360|c.19.1.3| HM:SCP:REP 16->221|1oxwA_|1.4e-31|29.4|194/0|c.19.1.3|1/1|FabD/lysophospholipase-like| OP:NHOMO 222 OP:NHOMOORG 194 OP:PATTERN ---------------------------------------------3---------------------- ----11-11111-1----------------------1--1-------------------------------12221111---------1111-1----------------------------------------------------------------------------------------------------111112122222222------222-------------11---------------------1-1--11-----11----1------1-1----------------------------------111-------11----------1-111111-1----21------------1-----1-------------------------------------------------------------------------------------------------------------------------------------------------------------1-1---------------------------------------1----------------------11---------------------------------21-1---1-1--1111---11112---1---------------11--1111111111111-1111111111111111111111--1111111111111111111-1111111--111111111111--------------1-------11---------1111111--------------------------------2--3-----23-11------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------1111211111-------12----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 8-15, 211-212, 214-215| PSIPRED cccccccccccccccccccEEEEEccHHHHHHHHHHHHHHHHHccccccEEEEEEccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccccHHHHHHccccEEEEEEEcccccEEEEEcccccccHHHHHHHHHHcccccccccEEEccEEEEcccEEccccHHHHHHccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHcccccc //