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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55834.1
DDBJ      :             putative acyl-CoA carboxylase alpha subunit
Swiss-Prot:             

Homologs  Archaea  53/68 : Bacteria  855/915 : Eukaryota  194/199 : Viruses  0/175   --->[See Alignment]
b.84.1b.84.2c.30.1d.126.1d.142.1
:598 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->437 2dzdA PDBj 7e-98 44.2 %
:BLT:PDB   532->597 1o78A PDBj 4e-10 43.9 %
:RPS:PDB   9->453 1dv1A PDBj 7e-89 42.1 %
:RPS:PDB   530->597 2ejfC PDBj 4e-15 42.6 %
:RPS:SCOP  16->127 1h70A  d.126.1.3 * 4e-23 8.6 %
:RPS:SCOP  121->357 1w93A3  d.142.1.2 * 1e-64 35.6 %
:RPS:SCOP  336->453 1bncA1  b.84.2.1 * 8e-28 32.7 %
:RPS:SCOP  531->598 1gjxA  b.84.1.1 * 4e-15 25.0 %
:HMM:SCOP  8->120 1w96A2 c.30.1.1 * 1.4e-45 61.9 %
:HMM:SCOP  122->336 1dv1A3 d.142.1.2 * 3.5e-63 38.6 %
:HMM:SCOP  336->456 1dv1A1 b.84.2.1 * 1.6e-40 52.6 %
:HMM:SCOP  515->598 1o78A_ b.84.1.1 * 3.1e-20 41.7 %
:RPS:PFM   9->117 PF00289 * CPSase_L_chain 3e-15 45.5 %
:RPS:PFM   122->329 PF02786 * CPSase_L_D2 2e-41 47.5 %
:RPS:PFM   341->451 PF02785 * Biotin_carb_C 2e-20 44.9 %
:RPS:PFM   531->595 PF00364 * Biotin_lipoyl 4e-06 50.8 %
:HMM:PFM   122->329 PF02786 * CPSase_L_D2 3.3e-80 43.3 208/211  
:HMM:PFM   9->117 PF00289 * CPSase_L_chain 9.9e-43 57.8 109/110  
:HMM:PFM   341->451 PF02785 * Biotin_carb_C 9.9e-37 50.5 107/107  
:HMM:PFM   532->597 PF00364 * Biotin_lipoyl 5.2e-21 43.9 66/74  
:BLT:SWISS 1->598 BCCA_MYCLE 0.0 69.5 %
:PROS 554->571|PS00188|BIOTIN
:PROS 160->174|PS00866|CPSASE_1
:PROS 292->299|PS00867|CPSASE_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55834.1 GT:GENE BAD55834.1 GT:PRODUCT putative acyl-CoA carboxylase alpha subunit GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1095467..1097263) GB:FROM 1095467 GB:TO 1097263 GB:DIRECTION - GB:PRODUCT putative acyl-CoA carboxylase alpha subunit GB:PROTEIN_ID BAD55834.1 LENGTH 598 SQ:AASEQ MPSHASARITKVLVANRGEIAVRVIRAAKDAGIASVAVYAEPDADAPFVKLADEAFALGGQTSAESYLVFDKILDAAAKSGADAIHPGYGFLSENADFAQAVIDAGLIWIGPSPQSIRDLGDKVTARHIAERANAPMAAGTKDPVKNADEVVEFAKQYGVPVAIKAAFGGGGRGMKVAHTIEEIPELFESATREAIAAFGRGECFVEQYLDKARHVEAQVIADKHGNVVVAGTRDCSLQRRFQKLVEEAPAPFLSDEVRAKIHESAKRICREAGYYGAGTVEYLVQGETVSFLEVNTRLQVEHPVTEETAGIDLVRQQFRIANGEELEIKEDPTPRGHAFEFRINGEDAGRNFLPAPGPVTVYREPAGPGVRVDSGVVQGSVIGGQFDSMLAKLIVYGENRTQALERARRALAEFEVEGLATVIPFHRAIVEHPAFIGDGEKFDVYTKWIETEWENTIEPYTGGGAPAEEDEDGPRQKVVVEVGGRRVEVSLPGNFSIGGGGGNGGGGAIRKKPKPRKRGGAGGGAASGDAVTAPMQGTVVKVAVEEGQSVEAGDLIVVLEAMKMENPVNAHKAGVVTGLAVEAGAAITQGTVLAEIK GT:EXON 1|1-598:0| BL:SWS:NREP 1 BL:SWS:REP 1->598|BCCA_MYCLE|0.0|69.5|597/598| PROS 554->571|PS00188|BIOTIN|PDOC00167| PROS 160->174|PS00866|CPSASE_1|PDOC00676| PROS 292->299|PS00867|CPSASE_2|PDOC00676| SEG 373->386|vdsgvvqgsviggq| SEG 404->414|alerarralae| SEG 463->475|gggapaeededgp| SEG 479->490|vvvevggrrvev| SEG 499->527|gggggnggggairkkpkprkrggagggaa| BL:PDB:NREP 2 BL:PDB:REP 8->437|2dzdA|7e-98|44.2|430/459| BL:PDB:REP 532->597|1o78A|4e-10|43.9|66/84| RP:PDB:NREP 2 RP:PDB:REP 9->453|1dv1A|7e-89|42.1|428/433| RP:PDB:REP 530->597|2ejfC|4e-15|42.6|68/69| RP:PFM:NREP 4 RP:PFM:REP 9->117|PF00289|3e-15|45.5|101/102|CPSase_L_chain| RP:PFM:REP 122->329|PF02786|2e-41|47.5|202/207|CPSase_L_D2| RP:PFM:REP 341->451|PF02785|2e-20|44.9|107/107|Biotin_carb_C| RP:PFM:REP 531->595|PF00364|4e-06|50.8|65/74|Biotin_lipoyl| HM:PFM:NREP 4 HM:PFM:REP 122->329|PF02786|3.3e-80|43.3|208/211|CPSase_L_D2| HM:PFM:REP 9->117|PF00289|9.9e-43|57.8|109/110|CPSase_L_chain| HM:PFM:REP 341->451|PF02785|9.9e-37|50.5|107/107|Biotin_carb_C| HM:PFM:REP 532->597|PF00364|5.2e-21|43.9|66/74|Biotin_lipoyl| GO:PFM:NREP 6 GO:PFM GO:0003824|"GO:catalytic activity"|PF00289|IPR005481| GO:PFM GO:0008152|"GO:metabolic process"|PF00289|IPR005481| GO:PFM GO:0003824|"GO:catalytic activity"|PF02786|IPR005479| GO:PFM GO:0005524|"GO:ATP binding"|PF02786|IPR005479| GO:PFM GO:0008152|"GO:metabolic process"|PF02786|IPR005479| GO:PFM GO:0016874|"GO:ligase activity"|PF02785|IPR005482| RP:SCP:NREP 4 RP:SCP:REP 16->127|1h70A|4e-23|8.6|105/255|d.126.1.3| RP:SCP:REP 121->357|1w93A3|1e-64|35.6|233/267|d.142.1.2| RP:SCP:REP 336->453|1bncA1|8e-28|32.7|113/116|b.84.2.1| RP:SCP:REP 531->598|1gjxA|4e-15|25.0|68/81|b.84.1.1| HM:SCP:REP 8->120|1w96A2|1.4e-45|61.9|113/0|c.30.1.1|1/1|PreATP-grasp domain| HM:SCP:REP 122->336|1dv1A3|3.5e-63|38.6|215/216|d.142.1.2|1/1|Glutathione synthetase ATP-binding domain-like| HM:SCP:REP 336->456|1dv1A1|1.6e-40|52.6|116/0|b.84.2.1|1/1|Rudiment single hybrid motif| HM:SCP:REP 515->598|1o78A_|3.1e-20|41.7|84/0|b.84.1.1|1/1|Single hybrid motif| OP:NHOMO 3779 OP:NHOMOORG 1102 OP:PATTERN --111211222222211--11--222211-12222334333331323332221-12-12-2-----13 3462A44522244355544-451156444444566656BB2654322133326354533355515684534233322212226542323323-2--1--212133312221111111111111112323422324435565111322223222122211111212131212111111111111223212212544444444444444446344534444664533333333624444444444444444444331112212-1-44222222213133311111111221111111111122222223222221222222221-3234222332232344443222123-13213232312323332231--1323755611111356453316575644444444445-33333432455186686567684444434445444445632333333533225451111111111--1111111111111111113644137645333443333333333444413445698622443344347455691133435422222222222644251224323332221545343335555565322323433433323221222224211113343434444343333343333363333441-12233------23452232222222222-2222222222222222222242444332222222224222222322222221122222222222211143333333333542422231231111222366666434344377774767844445766211111111223323333324222334333333322222222221111--------1-1-------------------------1-111-111-122 1111335-732-4453567766576775555554436545645566554645854554444453333324435445525532334322-56454333443435876-564A566BA926566649B5E5S*C-D9E55556568656546B6385943B6DP49444F548C7D45463a3337681386466785567 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 533 STR:RPRED 89.1 SQ:SECSTR ccccccccccEEEEcccHHHHHHHHHHHHHHTcEEEEEEEGGGTTcHHHHHccEEEEEEcccGGGTTTcHHHHHHHHHHHTccEEEccccTTTTcHHHHHHHHHTTcEEccccHHHHHHHHcHHHHHHHHHHTTcccccccccccccHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccEEEEEEEEEEccccEEEEEEEEEEEEETTEEEEEEEccTTccHHHHHHHHHHHHHHHHHHTcEEEEEEEEEEETTEEEEEEEEccccTTHHHHHHHHcccHHHHHHHHHTTcccccGGGcccccEEEEEEEEcccTTTTcccccEEcccEEccccTTEEEEccccTTcEEccccccEEEEEEEEEccHHHHHHHHHHHHHHcEEccccccHHHHHHHHHcHHHHHcTHHccccTTHHHHHTTcGGcEcc#################################################################cTTEEEccccEEEEEEcccTTcEEcTTcEEEEEEccccEEEEEccccEEccEEcccTTcEEcTTcEEEEcc DISOP:02AL 1-9, 519-526| PSIPRED ccccccccccEEEEEcccHHHHHHHHHHHHcccEEEEEcccHHHccccHHHccEEEEccccccccccccHHHHHHHHHHccccEEEEcccccccccHHHHHHHHcccEEEcccHHHHHHHccHHHHHHHHHHcccccccccccccccHHHHHHHHHHccccEEEEEccccccccEEEEccHHHHHHHHHHHHHHHHHHcccccEEEEEEccccEEEEEEEEEcccccEEEEEEEEcccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHccccEEEEEEEEEcccEEEEEEEccccccHHHHHHHHcccHHHHHHHHHccccccccccccccEEEEEEEEEEccccccccccccEEEEEEccccccEEEEccccccccccccccccEEEEEEEEccHHHHHHHHHHHHcccEEEEccccHHHHHHHHccHHHHccccccccccHHHHHHHHHHccccccccccccccccccEEEEEEEEccEEEEEEEccccEEccccccccccEEEEccccccccccccccccccEEEEccccEEEEEEEccccEEEcccEEEEEEEcccccEEEcccccEEEEEEEccccEEccccEEEEEc //