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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55842.1
DDBJ      :             putative two-component system response regulator
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  846/915 : Eukaryota  16/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:225 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->222 2oqrA PDBj 5e-41 41.1 %
:RPS:PDB   1->219 3c3wB PDBj 1e-22 25.4 %
:RPS:SCOP  4->104 1p2fA2  c.23.1.1 * 2e-21 33.7 %
:RPS:SCOP  124->224 1gxpA  a.4.6.1 * 5e-22 31.3 %
:HMM:SCOP  1->187 1s8nA_ c.23.1.1 * 7.1e-35 36.0 %
:RPS:PFM   4->104 PF00072 * Response_reg 4e-15 43.6 %
:RPS:PFM   145->222 PF00486 * Trans_reg_C 2e-11 53.2 %
:HMM:PFM   4->114 PF00072 * Response_reg 8.6e-28 36.9 111/112  
:HMM:PFM   147->222 PF00486 * Trans_reg_C 1.7e-25 49.3 75/77  
:BLT:SWISS 1->222 REGX3_MYCTU 4e-41 41.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55842.1 GT:GENE BAD55842.1 GT:PRODUCT putative two-component system response regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1103586..1104263 GB:FROM 1103586 GB:TO 1104263 GB:DIRECTION + GB:PRODUCT putative two-component system response regulator GB:PROTEIN_ID BAD55842.1 LENGTH 225 SQ:AASEQ MTAVLLAEDDEAIAAPLSRALGREGYTVTVESFGPAVLRRALEGNHDLLILDLGLPGMDGLEVCRQVRARGADLAVLMLTARTDEVDFVVGLDAGADDYVGKPFRLAELLARVRALLRRSGIGDEAVEVGGIRLEPAARRVLVNGVEVGLANKEYELLKVLIDRAGQVVPRETILREVWGDAELRGSKTLDMHMSWLRRKIGDEGPMAERRIVTVRGVGFRLNTD GT:EXON 1|1-225:0| BL:SWS:NREP 1 BL:SWS:REP 1->222|REGX3_MYCTU|4e-41|41.4|220/227| SEG 105->119|rlaellarvrallrr| BL:PDB:NREP 1 BL:PDB:REP 2->222|2oqrA|5e-41|41.1|219/226| RP:PDB:NREP 1 RP:PDB:REP 1->219|3c3wB|1e-22|25.4|205/210| RP:PFM:NREP 2 RP:PFM:REP 4->104|PF00072|4e-15|43.6|101/111|Response_reg| RP:PFM:REP 145->222|PF00486|2e-11|53.2|77/77|Trans_reg_C| HM:PFM:NREP 2 HM:PFM:REP 4->114|PF00072|8.6e-28|36.9|111/112|Response_reg| HM:PFM:REP 147->222|PF00486|1.7e-25|49.3|75/77|Trans_reg_C| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00486|IPR001867| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00486|IPR001867| GO:PFM GO:0003677|"GO:DNA binding"|PF00486|IPR001867| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00486|IPR001867| RP:SCP:NREP 2 RP:SCP:REP 4->104|1p2fA2|2e-21|33.7|98/120|c.23.1.1| RP:SCP:REP 124->224|1gxpA|5e-22|31.3|99/103|a.4.6.1| HM:SCP:REP 1->187|1s8nA_|7.1e-35|36.0|186/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 10520 OP:NHOMOORG 870 OP:PATTERN ---------------------------1-----------1---12-14-2-1---------------- 9JL7Q466778655CCCBB-BH44ACBBBBB9IEHGBFHFADEEAA687998CCF45711KIM6T7IOOQ8444465558IB7133669AED-A22---52D457M6H7D--------------132242236251OOORQF7CV5fNSSIHBFFCD756899EHADWYcD573454564434DF78934-B6HUUVUVSTVIVSWWURHJB9BDUUc7BCV7HFA99A9AfW7AA9A99899AAA9978995B675CC655466677BC655675586DED665888877777787777555556666755586655465665QIIYNNNRRRSROLEYUU7CEANJF8ABGN93YWGB8535546576227HA5KIIG65666HEQLMFACGNHJMBBABBBBBA9D-JLMIKLMLBJB1PKKMIGKPQKIHIM8C9C9HIAGHBBACCCCCCCCDDD9BPHB2221111111112333323223223212237BH66CFEBIPQTRWOJIIIDOOSVKIKJCJTQUQUSa12JNNPCKDCYHIJO7GMH9868D71211111754FRRBHI946G57NC769-RLPMHONCDEEEFMT9CC7686555556313433333BG3BF77HH9FGEK7FECJFLLIAJFJGGIIHGJKKK--25A67------GFGGEGBFGGGFGGHFF-GGGFFFFFFHGFFFFFFFEIIJDG888EEEEEEEEDEECECEEIEDEEEFF91DFFFFFFFFFFF--29333333433ADTCJ434333244443114BA9AB6A889HASQUTOWVXIUXXTJMMQ2212132124DFFLDDDDDHIJGHNPFBHBCDDD5545--L1332244--------2-2-------------------------38433566555J3 --------------1---------------------------------11--------------------------------------------------11--------------------------------------------------------2----3-1-------5-111-------4--D---2-B---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 224 STR:RPRED 99.6 SQ:SECSTR cEEEEEEcccHHHHHHHHHHHHTcTTEEEEEEEHHHHHHHHHHHcccEEEEccEETTEEHHHHHHHHHHHcTTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHGGGccHHHHHHHHHHHHHHHHHHHccTTTTccHHHHHHHHHHTTTccccEEEEEccHHHHHHHHTccHHHHHHHHHHHHHHTTcccEEccHHHHHHHHHTEEEcc# PSIPRED ccEEEEEEccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHccccccEEEEEccccHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHccccccccEEEccEEEEcccEEEEEccEEEEccHHHHHHHHHHHHcccccccHHHHHHHHcccccccccccHHHHHHHHHHHHcccccccccEEEEEcccEEEEccc //