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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55843.1
DDBJ      :             putative two-component system sensor kinase
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  281/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.30.2d.122.1
:435 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   193->405 2c2aA PDBj 1e-04 21.4 %
:RPS:PDB   207->419 3d36B PDBj 5e-12 15.0 %
:RPS:SCOP  197->266 2c2aA1  a.30.2.1 * 2e-04 14.3 %
:RPS:SCOP  279->419 1id0A  d.122.1.3 * 4e-12 21.5 %
:HMM:SCOP  200->270 1joyA_ a.30.2.1 * 1.9e-08 34.3 %
:HMM:SCOP  271->419 1gkzA2 d.122.1.4 * 1.2e-20 26.9 %
:RPS:PFM   319->410 PF02518 * HATPase_c 3e-05 33.7 %
:HMM:PFM   319->412 PF02518 * HATPase_c 3.5e-15 33.0 88/111  
:HMM:PFM   138->199 PF00672 * HAMP 1e-08 31.1 61/70  
:HMM:PFM   214->272 PF00512 * HisKA 1e-07 33.9 59/68  
:BLT:SWISS 200->435 MTRB_MYCTU 2e-12 32.5 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55843.1 GT:GENE BAD55843.1 GT:PRODUCT putative two-component system sensor kinase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1104265..1105572 GB:FROM 1104265 GB:TO 1105572 GB:DIRECTION + GB:PRODUCT putative two-component system sensor kinase GB:PROTEIN_ID BAD55843.1 LENGTH 435 SQ:AASEQ MRRRILRSMLAVLTITTVVLGVPLTYLAWLWVEDITRNDLRNRLDRIAAEVVAQEGVDGMVHGGLDVRAVRALVPVNGKLTVVYPAPQDNASRVDLGAAHVDDPLVESLAMGTSGSLRLEVPAAPMKEMQRQAVAVVALAVLASLGAAASVAVVTARRVADPLRDVAARAARLAMGDFRPDPRRHGIAELDRVSDVLDSATVEIAGRLQREHALVADVSHQLRSRLTAVRLRLDELSAHTDPEVVHEAEEAMAQVDRLTEAIDDLVRASRDEDAADRDPIAVLAELRGVVEEWKHPFDEAGRALLLAGDETLRAPVTASRLREAVTVLVDNALMHGDGTCTVSVRSVRPGYGREPLVCVEVADEGEGVRDELAPHIFDRGFSAGGSTGVGLALARALIEADGGRLELQRRRPALFRVFLGSSAPNRPVAITPEPR GT:EXON 1|1-435:0| BL:SWS:NREP 1 BL:SWS:REP 200->435|MTRB_MYCTU|2e-12|32.5|228/567| COIL:NAA 33 COIL:NSEG 1 COIL:REGION 243->275| TM:NTM 1 TM:REGION 9->31| SEG 133->174|avavvalavlaslgaaasvavvtarrvadplrdvaaraarla| SEG 267->278|rasrdedaadrd| BL:PDB:NREP 1 BL:PDB:REP 193->405|2c2aA|1e-04|21.4|210/240| RP:PDB:NREP 1 RP:PDB:REP 207->419|3d36B|5e-12|15.0|207/221| RP:PFM:NREP 1 RP:PFM:REP 319->410|PF02518|3e-05|33.7|86/112|HATPase_c| HM:PFM:NREP 3 HM:PFM:REP 319->412|PF02518|3.5e-15|33.0|88/111|HATPase_c| HM:PFM:REP 138->199|PF00672|1e-08|31.1|61/70|HAMP| HM:PFM:REP 214->272|PF00512|1e-07|33.9|59/68|HisKA| GO:PFM:NREP 1 GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| RP:SCP:NREP 2 RP:SCP:REP 197->266|2c2aA1|2e-04|14.3|70/89|a.30.2.1| RP:SCP:REP 279->419|1id0A|4e-12|21.5|135/146|d.122.1.3| HM:SCP:REP 200->270|1joyA_|1.9e-08|34.3|67/67|a.30.2.1|1/1|Homodimeric domain of signal transducing histidine kinase| HM:SCP:REP 271->419|1gkzA2|1.2e-20|26.9|145/193|d.122.1.4|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 438 OP:NHOMOORG 289 OP:PATTERN -----------------------2121--1-1------1--1-------------------------- 1212221-111---11111-1-1111111111----2133113-4122321-1---1-----1-4126451-------11211-------------------------1---------------------------233222114-21-12211----------1-1322-------------22111-1-212111111121111111----11111---11--11111141----------------------3----1---11-------121------------------------------------------------21-1----------1---------1--1--2111112----2--1----2--3112-----1-5211-3-1---1111111111--23133315112----11-------111211-1-2---1111111111122-13--------------------------------11--1-----3--2-2-----1121------32213-2--1212-22-21-2411-2-1--------------121--1-1-1--1-----21241--2---5-26-1-------------------------111---1----2------1-------------------1------2112---------1-1----------1----------11121-------------------2-------1---------------------------12---------------------------1--1---1131--11--1--------------1------------1-1-----------1---------------------------------------------1--------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 260 STR:RPRED 59.8 SQ:SECSTR ###############################################################################################################################################################################HHHHHHHHHHHHHHHHHHHHGGGcccTTcTTEEEccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEHHHHHHHHHHHHHHHHHHTTEEEEEEccccEEEEcHHHHHHHHHHHHHHHHHTcTTcEEEccEEEEEEEEETTEEEEEEEEccccccHHHHHHTTcTTccGGGccccHHHHHHHHHHHTTcEEEEEEETEEEEEEEEEccTTTcccccccccH DISOP:02AL 175-186, 241-243, 422-435| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccEEEcccccccccccccccccEEEEEcccccccccccEEEEEcccEEEEEEEccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccEEEEEEccccEEEEcHHHHHHHHHHHHHHHHHccccccEEEEEEEEcccccccEEEEEEEEccccccHHHHHHHccccEEccccccHHHHHHHHHHHHcccEEEEEEccccEEEEEEEEcccccccccccccc //