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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55852.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  42/68 : Bacteria  601/915 : Eukaryota  187/199 : Viruses  0/175   --->[See Alignment]
d.145.1d.58.32
:455 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   87->212 2uuuC PDBj 6e-14 34.2 %
:RPS:PDB   6->455 1e8gA PDBj 2e-62 14.4 %
:RPS:SCOP  9->214 1i19A2  d.145.1.1 * 8e-32 21.1 %
:RPS:SCOP  219->455 1f0xA1  d.58.32.2 * 1e-31 18.3 %
:HMM:SCOP  2->216 1f0xA2 d.145.1.1 * 2.3e-68 46.7 %
:HMM:SCOP  219->455 1e8gA1 d.58.32.1 * 9.8e-62 40.0 %
:RPS:PFM   43->179 PF01565 * FAD_binding_4 1e-12 35.8 %
:RPS:PFM   245->452 PF02913 * FAD-oxidase_C 1e-31 43.3 %
:HMM:PFM   218->453 PF02913 * FAD-oxidase_C 9.9e-65 36.4 236/249  
:HMM:PFM   41->179 PF01565 * FAD_binding_4 1e-43 40.9 137/138  
:BLT:SWISS 40->452 GLCD_BACSU 3e-78 39.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55852.1 GT:GENE BAD55852.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1111417..1112784) GB:FROM 1111417 GB:TO 1112784 GB:DIRECTION - GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD55852.1 LENGTH 455 SQ:AASEQ MARVDLHDLAAALSDGALHTDRDLLESYRQDWAKDPAAGVPLALVRAAGTADVVATLRWANEHRVPVVPRGAGSGLSGGATALDGGIVVSTERMRAITVDPVTRTAVVQPGLLNAEVKRAVAEYGLWYPPDPSSFEMCSIGGNAATNAGGLCCVKYGVTTDYVLGMEVVLADGTPVRLGGPRLKDSAGLSLTKLFVGSEGTLGIITELTLRLLPAQPRQSTVVASFADLSAATEAILAITAALRPSMLEFMDSVAINAVEDELRMGLDRSAAALLVARSDAPGEFAAREAELMAEACEKSGATEVFHTEDAQEGEAFTAARRFAIPAVERLGPLLLEDVGVPLPRLGELVTGIAEIARRNEVTVSVIAHAGDGNTHPLIVHDPTDADNTARAHRAFGEIMELAIALGGTITGEHGVGRLKKAWLPDQLGPDVIALTKRIKDALDPHGILNPGAIL GT:EXON 1|1-455:0| BL:SWS:NREP 1 BL:SWS:REP 40->452|GLCD_BACSU|3e-78|39.2|413/470| SEG 71->86|gagsglsggataldgg| SEG 231->243|aateailaitaal| BL:PDB:NREP 1 BL:PDB:REP 87->212|2uuuC|6e-14|34.2|120/541| RP:PDB:NREP 1 RP:PDB:REP 6->455|1e8gA|2e-62|14.4|450/550| RP:PFM:NREP 2 RP:PFM:REP 43->179|PF01565|1e-12|35.8|137/139|FAD_binding_4| RP:PFM:REP 245->452|PF02913|1e-31|43.3|208/242|FAD-oxidase_C| HM:PFM:NREP 2 HM:PFM:REP 218->453|PF02913|9.9e-65|36.4|236/249|FAD-oxidase_C| HM:PFM:REP 41->179|PF01565|1e-43|40.9|137/138|FAD_binding_4| GO:PFM:NREP 4 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01565|IPR006094| GO:PFM GO:0050660|"GO:FAD binding"|PF01565|IPR006094| GO:PFM GO:0003824|"GO:catalytic activity"|PF02913|IPR004113| GO:PFM GO:0050660|"GO:FAD binding"|PF02913|IPR004113| RP:SCP:NREP 2 RP:SCP:REP 9->214|1i19A2|8e-32|21.1|199/217|d.145.1.1| RP:SCP:REP 219->455|1f0xA1|1e-31|18.3|218/237|d.58.32.2| HM:SCP:REP 2->216|1f0xA2|2.3e-68|46.7|212/0|d.145.1.1|1/1|FAD-binding domain| HM:SCP:REP 219->455|1e8gA1|9.8e-62|40.0|230/0|d.58.32.1|1/1|FAD-linked oxidases, C-terminal domain| OP:NHOMO 2419 OP:NHOMOORG 830 OP:PATTERN 11-1-142123222221133321331111122----------------13211-------12113-11 12456--1111-2-33344-422255545553322238B7135432121111143311--33524674531--------1-141111111---1-------211121212---------------1222212211256644---132322222222222222222232222-1-----1----22233--131122222222223222353111122234413--------2------------------------1111----11--21------------------------------------------------------3-121111111212-122111121-1-1--2-461121--42--1--1-323311411111338652254565544444443446-56655A58553-6554459545877411155544564442222222242222325-----------------------------1136116444686696935555779A555544A688989144448765594755A444421135221222223245613724344353445-312112222443445232--1122112112111111111111331-1-3-1-2-1122221112222222222----5234------1111---31-2323223-123233223212323322--1-----1-------1--------1--1-------11111111111---1--111----31454-----1--------111111113425-4454554435556423321111311111--1222221121122222222232222111-221122--------1-1--------------------------11---2---421 ----332-741-2422454453455543333333333433333233544456684334344423324334224243313334445312-47443323332322433-323733353331-1332842528K5-4351211321311313131-23341569433321425225342333Y3322232-73312285632 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 455 STR:RPRED 100.0 SQ:SECSTR ccccGHHHHHHHHcGGGEEEccccccccccccccccccccccEEEccccHHHHHHHHHHHHHHTccEEEEcccccTTTTTTccccTEEEEcTTTcEEEEETTTTEEEEcTTccHHHHHHHHHHTTcTTTEEccccccTTccHHHHHHTTcccccTTccTGGGEEEEEEEETTccEEEcGGGGcccccccccccGGGGcccccEEEEEEEEEcEEccccEEEEEEEEccTTHHHHHHHHHHHTTccccccEEEEHHHHHHHHccGGGTccccccccHHHHHHHHHHHTcccEEEEEEEETTcTTcEEEcGGGccTTcHHHHHHHHTTTccccGGGGGGEEcccHHHHHHHHHHHHHHHHHHTccccEEEEEccccEEEEEEEETTcHHHHHHHHHHHHHHHHHHHHTTcccccccGGGHHHHHHHTcHHHHHHHHHHHHHHHHHcTTccccTTGGG DISOP:02AL 455-456| PSIPRED ccHHHHHHHHHHcccccEEccHHHHHHHHHccccccccccccEEEEcccHHHHHHHHHHHHHcccEEEEEccccccccccccccccEEEEcccccEEEEEccccEEEEEccccHHHHHHHHHHcccEEEEccccccccEEccccccccccccccccccHHHEEEEEEEEcccccEEEcccHHcccccccHHHHHHHccccccEEEEEEEEEEEEccccEEEEEEEEccHHHHHHHHHHHHHcccccEEHHccHHHHHHHHHHHHcccccccccEEEEEEcccHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHHHHHHHccccEEEEEEEcHHHHHHHHHHHHHHHHHccccEEEEEEEccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHccEEEEEcccccccHHHHHHHccHHHHHHHHHHHHHHcccccccccccc //