[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55862.1
DDBJ      :             putative transporter
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  47/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:428 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  1->417 1pw4A_ f.38.1.1 * 3.3e-42 24.9 %
:HMM:PFM   18->230 PF07690 * MFS_1 4.1e-14 22.0 186/353  
:HMM:PFM   251->419 PF07690 * MFS_1 7.8e-09 22.6 168/353  
:BLT:SWISS 11->129 MOSC_RHIME 7e-09 29.4 %
:BLT:SWISS 259->357 Y4WD_RHISN 3e-07 27.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55862.1 GT:GENE BAD55862.1 GT:PRODUCT putative transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1119247..1120533) GB:FROM 1119247 GB:TO 1120533 GB:DIRECTION - GB:PRODUCT putative transporter GB:PROTEIN_ID BAD55862.1 LENGTH 428 SQ:AASEQ MLDVPIDRRLRIARAAVFTVFGLNGFLLAMWVVHIPVVTDRTGIAHSTLGMFILLMAGAGIVGMRAAGPLADRFGSRTLVAAAAVVAALAVIGPGLATAPAGLAIALACFGFGNGALDVSMNAQAVHVERAYRRPIMSAFHALFSGGGLLGSLLGAAALRAGLDLRVTLVLASLACLALVALSVPRLLADRPAPAVEPSTASEHTAAEHIPAAEHRTAAEHTGPGVPTREGPGARLRPSAHGRKVLALAVIAFAVLLTEGVATDWSTLQMRERLGADDATAALAFGAFSVTMTGGRLVTDRVSGAFGPVAVVRYGTLLAALGLAVIMVSPWVPLTLAGWALCGLGLSGSVPQIFTAAGNLGSTTAATDMSRVFGLGYLGLLAGPAIIGWLTELIPLTAALIVPLLAVLACALSAGVVGAGRPAHARAR GT:EXON 1|1-428:0| BL:SWS:NREP 2 BL:SWS:REP 11->129|MOSC_RHIME|7e-09|29.4|119/407| BL:SWS:REP 259->357|Y4WD_RHISN|3e-07|27.3|99/377| TM:NTM 10 TM:REGION 15->37| TM:REGION 48->70| TM:REGION 84->106| TM:REGION 137->159| TM:REGION 165->187| TM:REGION 245->266| TM:REGION 304->326| TM:REGION 330->352| TM:REGION 373->395| TM:REGION 400->422| SEG 79->108|lvaaaavvaalavigpglatapaglaiala| SEG 139->184|afhalfsgggllgsllgaaalragldlrvtlvlaslaclalvalsv| SEG 245->257|vlalaviafavll| SEG 274->288|lgaddataalafgaf| SEG 374->390|glgylgllagpaiigwl| SEG 393->419|lipltaalivpllavlacalsagvvga| HM:PFM:NREP 2 HM:PFM:REP 18->230|PF07690|4.1e-14|22.0|186/353|MFS_1| HM:PFM:REP 251->419|PF07690|7.8e-09|22.6|168/353|MFS_1| HM:SCP:REP 1->417|1pw4A_|3.3e-42|24.9|405/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 48 OP:NHOMOORG 47 OP:PATTERN -------------------------------------------------------------------- ----1-------------------------------1111-------1-------------1----1---2----------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1---11-1111----------1-------------------------------------------------------------1-1111-111111-11111--1-1------11------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------1-1-----------------1-----------------------------------------------------------------111-1-------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 218-234, 422-428| PSIPRED cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc //