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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55863.1
DDBJ      :             putative acyl-CoA hydrolase
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  172/915 : Eukaryota  59/199 : Viruses  0/175   --->[See Alignment]
d.38.1
:155 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->152 2o6tI PDBj 3e-36 50.7 %
:RPS:PDB   19->152 2av9E PDBj 3e-21 49.6 %
:RPS:SCOP  29->145 2gf6A1  d.38.1.1 * 3e-30 23.0 %
:HMM:SCOP  18->152 2hljA1 d.38.1.1 * 4.6e-34 33.8 %
:RPS:PFM   37->115 PF03061 * 4HBT 2e-04 32.4 %
:HMM:PFM   36->117 PF03061 * 4HBT 2e-19 24.7 77/79  
:BLT:SWISS 29->139 YSMA_BACSU 3e-06 30.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55863.1 GT:GENE BAD55863.1 GT:PRODUCT putative acyl-CoA hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1120535..1121002 GB:FROM 1120535 GB:TO 1121002 GB:DIRECTION + GB:PRODUCT putative acyl-CoA hydrolase GB:PROTEIN_ID BAD55863.1 LENGTH 155 SQ:AASEQ MSTVPSDPAPTRVGRVTQQYPVLWPMPTRWADNDHYGHVNNVTYYSYFDTAVNAWLMKATGTDIRELPALGVVAQTSCRYHGSISFPDRLQVGLRIARLGRSSITYDLAIFRETDDGLELSATGEFVHVYVDAQTRKPVEIPAVIRTAAAELVTD GT:EXON 1|1-155:0| BL:SWS:NREP 1 BL:SWS:REP 29->139|YSMA_BACSU|3e-06|30.8|107/147| BL:PDB:NREP 1 BL:PDB:REP 8->152|2o6tI|3e-36|50.7|138/145| RP:PDB:NREP 1 RP:PDB:REP 19->152|2av9E|3e-21|49.6|131/136| RP:PFM:NREP 1 RP:PFM:REP 37->115|PF03061|2e-04|32.4|74/79|4HBT| HM:PFM:NREP 1 HM:PFM:REP 36->117|PF03061|2e-19|24.7|77/79|4HBT| RP:SCP:NREP 1 RP:SCP:REP 29->145|2gf6A1|3e-30|23.0|113/134|d.38.1.1| HM:SCP:REP 18->152|2hljA1|4.6e-34|33.8|133/0|d.38.1.1|1/1|Thioesterase/thiol ester dehydrase-isomerase| OP:NHOMO 281 OP:NHOMOORG 234 OP:PATTERN -------------------------111---------------------------------------- --------------21111-11--1111111111111121----------------------1-11----------------1-------------------------1---------------------------111-----1---------------------------------------1-------1----------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------111-----111------------1111111-----------1-----12--1---1111---------------1111------------------------------------11-11111112222211122222211112-12-222121211312112--1----1-----------111----------------1-----------1--1------------------------------11---1----1111--1111-1--1-----------------------------------------------------------------------------------------------------1-----111--1------------------2222222221-122221111321221----------------1------11111111111111--------------------------------------------------------------- --------------2111111111-1111-1--1111111-1111-111111-1111-1-1-1---------------------------3-1111----11-1-1--1-1-------------11----1---------1-----------------1121---------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 149 STR:RPRED 96.1 SQ:SECSTR ###HHcccHHHHTTccccGccEEEEEEccGGGccTTccccHHHHHHHHHHHHHHHHHHHccHHHHHTcEEEEEEEEEEEEcccccTTcEEEEEEEEEEEcccEEEEEEEEEETTccTEcccEEEEEEEEEEETTTcccccccHHHHHHHHTT### DISOP:02AL 1-15| PSIPRED ccccccccccccccccccccEEEEEEEEEHHHcccccEEEHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEEEEEEccccccEEEEEEEEEEEcccEEEEEEEEEEccccccEEEEEEEEEEEEEEccccccEEccHHHHHHHHHHHcc //