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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55868.1
DDBJ      :             putative branched-chain alpha-keto acid dehydrogenase component
Swiss-Prot:             

Homologs  Archaea  22/68 : Bacteria  776/915 : Eukaryota  192/199 : Viruses  0/175   --->[See Alignment]
a.9.1b.84.1c.43.1
:510 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->79 1labA PDBj 3e-13 43.7 %
:BLT:PDB   280->493 1b5sA PDBj 1e-33 36.9 %
:RPS:PDB   9->80 3bg5B PDBj 7e-14 22.2 %
:RPS:PDB   235->254 3dufI PDBj 7e-04 60.0 %
:RPS:PDB   279->497 1b5sA PDBj 2e-59 36.1 %
:RPS:SCOP  9->80 1y8nB1  b.84.1.1 * 2e-12 30.6 %
:RPS:SCOP  235->254 1balA  a.9.1.1 * 4e-04 30.0 %
:RPS:SCOP  279->497 1b5sA  c.43.1.1 * 2e-60 36.1 %
:HMM:SCOP  6->103 1y8oB1 b.84.1.1 * 1.6e-22 39.8 %
:HMM:SCOP  218->268 1balA_ a.9.1.1 * 2.5e-10 49.0 %
:HMM:SCOP  267->507 1b5sA_ c.43.1.1 * 1.5e-76 46.5 %
:RPS:PFM   13->78 PF00364 * Biotin_lipoyl 1e-08 40.9 %
:RPS:PFM   280->496 PF00198 * 2-oxoacid_dh 9e-44 43.8 %
:HMM:PFM   279->507 PF00198 * 2-oxoacid_dh 4.5e-77 46.5 228/231  
:HMM:PFM   9->80 PF00364 * Biotin_lipoyl 6.7e-20 37.5 72/74  
:HMM:PFM   226->263 PF02817 * E3_binding 2.1e-17 60.5 38/39  
:BLT:SWISS 9->78,235->497 ODP2_LEIXX 4e-56 45.2 %
:PROS 32->61|PS00189|LIPOYL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55868.1 GT:GENE BAD55868.1 GT:PRODUCT putative branched-chain alpha-keto acid dehydrogenase component GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1124734..1126266 GB:FROM 1124734 GB:TO 1126266 GB:DIRECTION + GB:PRODUCT putative branched-chain alpha-keto acid dehydrogenase component GB:PROTEIN_ID BAD55868.1 LENGTH 510 SQ:AASEQ MHDDGNVLEFRLPDLGEGLTDAELVSWSVAVGDHVDLNQTIAEVETAKAVVALPCPYAGTVAALLADPGETVPVGAPLIRVRADGAGSAVGSGGDAARGAENGSGAGSGGGAPGGGGAATADGADIGNGGGSTVPAENAGAGGGAGADASASASFDAGADADADAGGGGGGGAGAGAGADSDAGAASGNGRRSVLVGYGPEAEQQTRRRRTTAPVPVARPAAVAARPAATPAARKLARELGVDLWQVDGSGPNGAVTVDDVRAAATPTGAAVAEPGPAREERTPVTGVRKRTAAAMVTSATTIPQASTFVTVDCTATMELIDHLRTTPAFAGLSLTPLVVVAKAVLAALAEFPGVNAQWDEERQQIVTKRYVHLGIAAATDRGLLVPSVKEAHRLSLRELCAEIGRTIEAARAGTATPADLTGGTFTITNVGVFGVDSGVPLVNPGEAAILCLGAIGRRPWVVADELAVRWVTTLGLSFDHRLIDGELAARFLATVAGLLTDPLTLLSRL GT:EXON 1|1-510:0| BL:SWS:NREP 1 BL:SWS:REP 9->78,235->497|ODP2_LEIXX|4e-56|45.2|331/452| PROS 32->61|PS00189|LIPOYL|PDOC00168| SEG 81->131|vradgagsavgsggdaargaengsgagsgggapggggaatadgadignggg| SEG 139->188|agagggagadasasasfdagadadadagggggggagagagadsdagaasg| SEG 206->234|trrrrttapvpvarpaavaarpaatpaar| SEG 255->278|avtvddvraaatptgaavaepgpa| SEG 338->350|lvvvakavlaala| SEG 499->509|lltdpltllsr| BL:PDB:NREP 2 BL:PDB:REP 9->79|1labA|3e-13|43.7|71/80| BL:PDB:REP 280->493|1b5sA|1e-33|36.9|214/242| RP:PDB:NREP 3 RP:PDB:REP 9->80|3bg5B|7e-14|22.2|72/1074| RP:PDB:REP 235->254|3dufI|7e-04|60.0|20/38| RP:PDB:REP 279->497|1b5sA|2e-59|36.1|219/242| RP:PFM:NREP 2 RP:PFM:REP 13->78|PF00364|1e-08|40.9|66/74|Biotin_lipoyl| RP:PFM:REP 280->496|PF00198|9e-44|43.8|217/232|2-oxoacid_dh| HM:PFM:NREP 3 HM:PFM:REP 279->507|PF00198|4.5e-77|46.5|228/231|2-oxoacid_dh| HM:PFM:REP 9->80|PF00364|6.7e-20|37.5|72/74|Biotin_lipoyl| HM:PFM:REP 226->263|PF02817|2.1e-17|60.5|38/39|E3_binding| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00198|IPR001078| GO:PFM GO:0008415|"GO:acyltransferase activity"|PF00198|IPR001078| RP:SCP:NREP 3 RP:SCP:REP 9->80|1y8nB1|2e-12|30.6|72/97|b.84.1.1| RP:SCP:REP 235->254|1balA|4e-04|30.0|20/51|a.9.1.1| RP:SCP:REP 279->497|1b5sA|2e-60|36.1|219/242|c.43.1.1| HM:SCP:REP 6->103|1y8oB1|1.6e-22|39.8|98/0|b.84.1.1|1/1|Single hybrid motif| HM:SCP:REP 218->268|1balA_|2.5e-10|49.0|51/51|a.9.1.1|1/1|Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex| HM:SCP:REP 267->507|1b5sA_|1.5e-76|46.5|241/242|c.43.1.1|1/1|CoA-dependent acyltransferases| OP:NHOMO 2661 OP:NHOMOORG 990 OP:PATTERN 11------1111111---111---2111--11----------------------------1111---- 1223512122222242333-322242333333444435653443344433335574462244434274544-----------3-----111--1--22233334333333333333333333332---1----11-34433---221111111111111111111111111111111111111333331--324444444443444444464454444455344322222242233333333333333344432-1-22-1---111111111111111111111112211111-111111111111111111211111111111---1111111-1--111---------3--------------11311-13-2422222222224223222222244444433443-224225232422233232533344223233242222222222222222222222222222222221222222222222222222235831232233443443333322243333253333333233332222222444222211112322222222223322-1-2----------323133421333333-21-----------------------1--3223323343434333343333333333441-2432212122232222222222233322-222223322223222222323322232222222222222222222222222222222222222222223333333333223232222222222222223333323222324444333333333222222222222211223222223323333333332222222111-222221----------111111-1-11111111211111-------------222 11--444-733-3333232343344433333333333423333333223343441233333332222222222122222222222222-23222222322332545-34474666564343244453739c4-64B2422523544444344252853449F36342434A54532434w434458AEC3B55494563 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 317 STR:RPRED 62.2 SQ:SECSTR ##cccccEcTTcTTEEEccccEEEEEEcccTTcEEcTTcEEEEEEccccEEEEEccccEEEEEEcccTTcEEcTTcEEEE##########################################################################################################################################################HHHHHTTccTTTcccccccc########################ccccccccHHHHHHHHHHHHHTTcccccEEEEEEEcHHHHHHHHHTHHHHHHTTcccccHHHHHHHHHHHHHHcGGGcccccTTcccccccccccEEEcEEccccEEccEETTGGGccHHHHHHHHHHHHHHHHTTcccGGGGcccccEEEEcTTTccccccccccTTccEEEEEcccEEEEEEccccEEEEEEEEEEEEEcTTTcccHHHHHHHHHHH############# DISOP:02AL 1-3, 83-133, 145-171, 184-290| PSIPRED ccccccEEEEEcccccccccEEEEEEEEEccccEEccccEEEEEEcccEEEEEccccccEEEEEEcccccEEccccEEEEEEccccccccccccccccccccccccccccccccccccHHcccccccccccccEEEHcccccccccccHHHHHHHHHccHHHHccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccHHHcccccccccccHHHHHHHcccccccccccccccccEEccHHHHHHHHHHHHHHHHcccEEEEEEEEcHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccEEEEEEEccccEEEEcccccEEEEEEccccEEEEEEcccccccHHHHHHHHHHHHHHHHHccccHHHHccccEEEEEccccccEEEEEEEccccEEEEEEcccEEEEEEEccEEEEcEEEEEEEEEcccEEEHHHHHHHHHHHHHHHHcHHHHHHcc //