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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55872.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  6/199 : Viruses  1/175   --->[See Alignment]
c.66.1
:277 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   109->191 3e23A PDBj 2e-06 37.0 %
:RPS:PDB   119->270 3a25A PDBj 6e-06 14.2 %
:RPS:SCOP  110->203 2p7hA1  c.66.1.41 * 2e-06 19.3 %
:HMM:SCOP  112->162 1vl5A_ c.66.1.41 * 3.1e-07 35.4 %
:HMM:PFM   128->162 PF03686 * UPF0146 0.00047 37.1 35/127  
:BLT:SWISS 125->163 RRMJ_THEAC 5e-05 43.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55872.1 GT:GENE BAD55872.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1129600..1130433 GB:FROM 1129600 GB:TO 1130433 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55872.1 LENGTH 277 SQ:AASEQ MTALVLTPERRSELAALLGDGLRLRAEFPKVADYLDIAPMLAGTADQEADAAFDLRFVHYMTGGSEESANPYWDIVAPSITVDGERRVVDGGNPGGSVRLGFVQTILQSAYAYAVPSPETLSWIGAFSEGRRVLELGAGRGYWAKQLADHGVDVRAFDAEPPDSTANPSFPGAEGQRDVWFPVSGLDEFDADLDGESVLFLCWPPGWGDPMASAALEKFETRGGRRVIFIGEPQGGKTGDDAFFARLSEAWRLESEDPHHVSWWNLGDVAQGWVRPG GT:EXON 1|1-277:0| BL:SWS:NREP 1 BL:SWS:REP 125->163|RRMJ_THEAC|5e-05|43.6|39/205| SEG 14->26|laallgdglrlra| BL:PDB:NREP 1 BL:PDB:REP 109->191|3e23A|2e-06|37.0|81/196| RP:PDB:NREP 1 RP:PDB:REP 119->270|3a25A|6e-06|14.2|148/264| HM:PFM:NREP 1 HM:PFM:REP 128->162|PF03686|0.00047|37.1|35/127|UPF0146| RP:SCP:NREP 1 RP:SCP:REP 110->203|2p7hA1|2e-06|19.3|88/229|c.66.1.41| HM:SCP:REP 112->162|1vl5A_|3.1e-07|35.4|48/0|c.66.1.41|1/1|S-adenosyl-L-methionine-dependent methyltransferases| OP:NHOMO 8 OP:NHOMOORG 8 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----11-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111- ----------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 170 STR:RPRED 61.4 SQ:SECSTR ###########################################################################################################ccccccHHHHHHHHHHHHHccTTcEEEETTcTTTTTHHHHHHHTcEEEEEcccHHHHHHHHHHHHHTTcTTTEEEEccTcGGGccccccEEEEEEcccccGGGGHHHHHHHEEEEEEEEEEEEEEcccGGGTTTTTHHHHHHHHHTTTcEEEEEEEEEcccccHHHHHTT DISOP:02AL 17-18,20-20,25-25,54-74,269-270,274-278| PSIPRED ccEEEEcHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHcccccccccccEEEEEEEEEcccccccccccHHHHHcccccccEEEEEccccccccEEEHHHHHHHHHHHHHccccHHHHHHHHHHHccccHHHHccccHHHHHHHHHccccEEEEcccccccEEEccccccccccEEEEEccccccccccccccEEEEEEEccccccHHHHHHHHHHccccccEEEEEEccccccccHHHHHHHHHHHHccccccccEEEEccHHHHHHcccccc //