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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55880.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  61/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.1.9
:359 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   295->355 3cjpA PDBj 5e-04 20.8 %
:RPS:SCOP  103->356 2ffiA1  c.1.9.15 * 2e-09 20.9 %
:HMM:SCOP  8->356 2ffiA1 c.1.9.15 * 4.9e-32 27.3 %
:HMM:PFM   9->355 PF04909 * Amidohydro_2 1.7e-24 20.2 257/270  
:BLT:SWISS 3->355 Y4MH_RHISN 6e-22 32.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55880.1 GT:GENE BAD55880.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1139343..1140422) GB:FROM 1139343 GB:TO 1140422 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55880.1 LENGTH 359 SQ:AASEQ MDLSDLRIIDAHIHQWDPLATPRDFSHLARLFRYLPVPIHLAAKLARRSDREFVGDPTAYAHPYLPADYRADAVGVPVAGVAHIEVDWSNTGPTAKADETRWVASLPFGVDTPRLTAILGSADPAAPGFPELLDAHQTASPLFRGIRTMVAHHPDPGVRQFAPTEDALTSSAFLDGFAELVRRGLVFEAWVYSNQLLQVTGLAKRYPEATIVLDHLATPVGLFGRIGKHTGRTPEDRRDLLLRWQDDLAALAEHPNVVAKVSGLAMPILGHPVPRRGSTTTAPVLLDRIRPLLTHAMDCFGTERLIWGSNFPVDKPITTIADSAQAVGTALTEHGGDRADLARVFGGNAERVYRIEPPE GT:EXON 1|1-359:0| BL:SWS:NREP 1 BL:SWS:REP 3->355|Y4MH_RHISN|6e-22|32.5|295/100| SEG 71->82|adavgvpvagva| SEG 236->252|drrdlllrwqddlaala| RP:PDB:NREP 1 RP:PDB:REP 295->355|3cjpA|5e-04|20.8|53/262| HM:PFM:NREP 1 HM:PFM:REP 9->355|PF04909|1.7e-24|20.2|257/270|Amidohydro_2| RP:SCP:NREP 1 RP:SCP:REP 103->356|2ffiA1|2e-09|20.9|215/271|c.1.9.15| HM:SCP:REP 8->356|2ffiA1|4.9e-32|27.3|267/0|c.1.9.15|1/1|Metallo-dependent hydrolases| OP:NHOMO 94 OP:NHOMOORG 64 OP:PATTERN -------------------------------------------------------------------- 1---1-------------------1------1----1---------------1-------------2--------------------------------------1---------------------------------11----1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------312----------1-----1-1------2---31----1111111-1--22-111-1----1----------------------------------------------122---32--322231-----1144--------31------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------1111----------------------------------------1-11------------------------------------------------------------------ ------2----------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 68 STR:RPRED 18.9 SQ:SECSTR #########################################################################################################################################################################################################################################################################################EEcTTcccHHHHHHHHHHHcTTTEEccccTTcccHHHHHH#######HHHHHHcccHHHHHHHHTHHHHHHHTcc### DISOP:02AL 1-3| PSIPRED cccccccEEccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccHHHHHHHHHHcccEEEEEEEEcccccccccHHHHHHHHHHHHHHcccccEEEEEEEEcccccccHHHHHHHHHccccEEEEEEEcccccccccccccccHHHcccHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHcccccEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEEcccHHHccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHccHHHHccccccc //