[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55882.1
DDBJ      :             putative methylmalonic acid semialdehyde dehydrogenase
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  789/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
c.82.1
:510 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->484 1t90A PDBj e-118 42.8 %
:RPS:PDB   2->484 3ek1B PDBj e-110 27.5 %
:RPS:SCOP  3->483 1uzbA  c.82.1.1 * e-103 29.9 %
:HMM:SCOP  1->483 1uzbA_ c.82.1.1 * 9.2e-154 43.0 %
:RPS:PFM   30->460 PF00171 * Aldedh 1e-66 39.6 %
:HMM:PFM   17->479 PF00171 * Aldedh 1.7e-144 40.7 457/462  
:BLT:SWISS 7->490 MMSA_PSEAE e-132 49.0 %
:PROS 275->286|PS00070|ALDEHYDE_DEHYDR_CYS
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55882.1 GT:GENE BAD55882.1 GT:PRODUCT putative methylmalonic acid semialdehyde dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1143963..1145495 GB:FROM 1143963 GB:TO 1145495 GB:DIRECTION + GB:PRODUCT putative methylmalonic acid semialdehyde dehydrogenase GB:PROTEIN_ID BAD55882.1 LENGTH 510 SQ:AASEQ MVRELTHFIGGQHVAGTSGKFGDVYDPNIGQVQARVPLASKSEVEAAIANAEAAQQEWAAFNPQKRARVMMKFLALVQDEMDSLAALLSSEHGKTIADAKGDIQRGLEVIEFAVGIPHLLKGEYTEGAGTGIDVYSMRQPLGVVAGITPFNFPAMIPLWKAGPALACGNAFVLKPSERDPSVPLRLAELFLEAGLPAGVFNVINGDKEAVDTLLHDPRIKAVGFVGSTPIAQYIYETATANGKRAQCFGGAKNHAIVMPDADLDDVADQLIGAGYGSAGERCMAISVAVPVGEETADRLVAKLTERVHKLNVGRSDDPGADFGPLVGKDGVDRVNNYVQIGIDEGAELVVDGRGLTVEGGEDGYFVGATLFDKVTPEMRIYKEEIFGPVVSVVRAKDYEEGLRLANEHEYGNGVAIFTRDGDTARDFAARVQVGMVGINVPIPVPIAYYTFGGWKRSGFGDLNQHGPDSIRFYTKTKTVTQRWPDGGSRAVLSGRSAGSASNAFVIPTMD GT:EXON 1|1-510:0| BL:SWS:NREP 1 BL:SWS:REP 7->490|MMSA_PSEAE|e-132|49.0|482/497| PROS 275->286|PS00070|ALDEHYDE_DEHYDR_CYS|PDOC00068| SEG 43->60|eveaaianaeaaqqewaa| BL:PDB:NREP 1 BL:PDB:REP 2->484|1t90A|e-118|42.8|479/484| RP:PDB:NREP 1 RP:PDB:REP 2->484|3ek1B|e-110|27.5|473/483| RP:PFM:NREP 1 RP:PFM:REP 30->460|PF00171|1e-66|39.6|424/440|Aldedh| HM:PFM:NREP 1 HM:PFM:REP 17->479|PF00171|1.7e-144|40.7|457/462|Aldedh| GO:PFM:NREP 3 GO:PFM GO:0008152|"GO:metabolic process"|PF00171|IPR015590| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00171|IPR015590| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00171|IPR015590| RP:SCP:NREP 1 RP:SCP:REP 3->483|1uzbA|e-103|29.9|472/516|c.82.1.1| HM:SCP:REP 1->483|1uzbA_|9.2e-154|43.0|474/516|c.82.1.1|1/1|ALDH-like| OP:NHOMO 9835 OP:NHOMOORG 1035 OP:PATTERN 221-1-4754454653-312111-A4432-521-11111111211222124431-1--1-13351--1 7995N947AAD547KOL9A-9N11Jb99999FSQWSMV**8M6U67791744VJPDAA--CEN3CEOLJJB----111-122H11111--12-211---52637494656--------------12211221221266677---6445533431311-1131223245554-111---1-11-65745-1-C89999998AAAA99887EDAA6B9AB9HFDF86222221D54555555555555558667711112311111121122-11122---2222111-221111111111122212222222221--111---2-11162223223221-211-2222112131---2211---1--1---1118-5IEEA11111B6GBK5469A797FGHHFDHCHGG-46D53J6ANOB-NJJLLMWRNWQQE9AC5AHQCAAC8JJEDEEEEEEADC6466811111111----1111-1111-11-11118APeB2BOKDDdYbaYbQKKKGZYbePPNMBNtUvMZUK14GCFC9CA8HDNCKQ333-112A62444444132AC6644-3331332222-33334354433339A15211322211211111111112-11143981894K7DB89AAAA9AA888987A99BD-1-5421------A966587A998A878AB-9B9B988B7A98ABB9BB8IKI99894A98998999A77A797I773667621466687657888--1533122888717DKV222112-----2223JILFH7G7C9H1KKJKKONUGSSOOBKHJ3211132122433A566668B88B8999997555------1-441111--------2-2----1---1--2-111-12--111111112-2-2-331 ----CBA-A53-8A7IJLLONQKRTRPEECCCCEEDEFDEEEEBCCDDKUTb*kMMEBDDDCD9B6AA4B88D9A883888AA9AC57-IREJCGCECC9B9FFCF-9IBXOgHJNOB9CAEKFPQ7VCr*Q-SOUCGC9PEFNDAFED9I88YCFDGMKaVCOFB8SBCGAKNC5775*66569JCXWKIQ88SFVJB ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 488 STR:RPRED 95.7 SQ:SECSTR cGccccEEETTEEEccTTccEEEEEcTTTccEEEEEEcccHHHHHHHHHHHHHHHHHHHTccHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHTTcccEEEccccTTEEEEEEEEEccEEEEEcccccTTHHHHHHHHHHHHHTcEEEEEccTTcHHHHHHHHHHHHHTTccTTTEEEccccHHHHHHHHHcTTEEEEEEEccHHHHHHHHHHHGGGTcEEEEEccccEEEEEcTTccHHHHHHHHHHHHHGGGGccTTcEEEEEEEEHHHHHHHHHHHHHHHHTcccccTTcTTccccccccHHHHHHHHHHHHHHHHTTcEEEEcccccccccEEETTEEccEEEEEEcTTcGGGTccccccEEEEEEEccHHHHHHHHHccccccEEEEEcccHHHHHHHHHHccccEEEEcccccccTccccccccGGGEEccccccHHHHGGGGEEEEEEEEEcccccc###################### DISOP:02AL 510-511| PSIPRED ccccccEEEccEEEccccccEEEEEccccccEEEEcccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEccccccEEEEEEEccccEEEEEccccHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHccccccEEEEEccHHHHHHHHHHHHccccEEEEEccccccEEEcccccHHHHHHHHHHHHHHHcccEEEEccEEEEEEccHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEcccccccccccccEEEccEEccccccccEEEEEcccccEEEEEEEccHHHHHHHHccccccEEEEEEcccHHHHHHHHHHccccEEEEccccccccccccccccccccccccccccHHHHHHHHHEEEEEEEcccccccccccccccccccccEEccccc //