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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55913.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  28/68 : Bacteria  393/915 : Eukaryota  66/199 : Viruses  0/175   --->[See Alignment]
a.25.2
:193 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   29->188 2g2dA PDBj 2e-65 71.2 %
:RPS:PDB   7->188 3ci4A PDBj 3e-63 37.4 %
:RPS:SCOP  31->184 1nogA  a.25.2.2 * 4e-53 37.2 %
:HMM:SCOP  6->186 1rtyB_ a.25.2.2 * 2.3e-57 55.2 %
:RPS:PFM   8->174 PF01923 * Cob_adeno_trans 3e-40 60.6 %
:HMM:PFM   8->177 PF01923 * Cob_adeno_trans 3.4e-59 51.9 162/162  
:BLT:SWISS 1->188 PDUO_MYCLE 3e-81 75.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55913.1 GT:GENE BAD55913.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1177121..1177702 GB:FROM 1177121 GB:TO 1177702 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55913.1 LENGTH 193 SQ:AASEQ MSVHLTRIYTRTGDDGTTGLSDFSRVPKTDPRLVAYADCDETNAAIGVALALGDPDERVRPVLRQVQNDLFDAGADLSTPVVAEPKHPPLRITQDYIDRLEKWCDEFNAELAPLNSFILPGGTPLAALLHTARTVARRAERSAWAAVRSYPDDTSVLPARYLNRLSDLLFILSRYTNPDGDVLWRPGGAESAR GT:EXON 1|1-193:0| BL:SWS:NREP 1 BL:SWS:REP 1->188|PDUO_MYCLE|3e-81|75.5|188/191| BL:PDB:NREP 1 BL:PDB:REP 29->188|2g2dA|2e-65|71.2|160/160| RP:PDB:NREP 1 RP:PDB:REP 7->188|3ci4A|3e-63|37.4|179/187| RP:PFM:NREP 1 RP:PFM:REP 8->174|PF01923|3e-40|60.6|160/163|Cob_adeno_trans| HM:PFM:NREP 1 HM:PFM:REP 8->177|PF01923|3.4e-59|51.9|162/162|Cob_adeno_trans| GO:PFM:NREP 3 GO:PFM GO:0005524|"GO:ATP binding"|PF01923|IPR002779| GO:PFM GO:0008817|"GO:cob(I)yrinic acid a,c-diamide adenosyltransferase activity"|PF01923|IPR002779| GO:PFM GO:0009236|"GO:cobalamin biosynthetic process"|PF01923|IPR002779| RP:SCP:NREP 1 RP:SCP:REP 31->184|1nogA|4e-53|37.2|145/149|a.25.2.2| HM:SCP:REP 6->186|1rtyB_|2.3e-57|55.2|174/180|a.25.2.2|1/1|Cobalamin adenosyltransferase-like| OP:NHOMO 541 OP:NHOMOORG 487 OP:PATTERN ------2222222222--------11111111----------------------1111--1111--11 --111-11111-1-11111-111111111111111111111111---1------------11111111111-----------------2212-222---1-111121211--------------1-----1---1111111---11-------------------------------------11111---111111111111111111111111111111111122222211--------------------1121111-11---2211-------------------------------------------2----------12---------1-1-----111-----1--------------1----111-11111-----111111111111111111111111-11111111111-111111111111111111111122111111111111-111111------------------------------11111111111111111111111111111111111111111111311111111-111-11111---------111111----------------------111111-1----------------------------1111----------------------------1111------1--------------1-------1------1-----1222-----11-1111111111111-------1--1--------------1---------111-----------------11111111111-11111111111111111------------------------1111111111--------111111------------------------------------11111-------- ----221-21----1----------------------------------------------------------------------------------------11--1-111-1111-1-11111--3-151-112-111111-1-1---1111-11-11-11111-----1131-111711-1---------1111-1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 184 STR:RPRED 95.3 SQ:SECSTR ####cccccccGGGGcEEEcccccEEETTcHHHHHHHHHHHHHHHHHHHHTTccTTTGGHHHHHHHHHHHHHHHHHHTccTTcTTcccccccHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHTTccccHHHHHHHHHHHHHHHHHHHHHHHHTccccccTTcc##### DISOP:02AL 189-193| PSIPRED ccccccccEEEccccccccccccEEcccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcHHHccccccccccccccccHHHHHHHHHHHHHHHHHccHHHcEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccc //