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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55919.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  23/68 : Bacteria  156/915 : Eukaryota  21/199 : Viruses  0/175   --->[See Alignment]
d.32.1
:162 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   32->155 1jc5F PDBj 1e-23 44.7 %
:RPS:PDB   32->161 1cjxA PDBj 7e-11 9.4 %
:RPS:SCOP  32->156 1jc4A  d.32.1.4 * 1e-13 40.8 %
:HMM:SCOP  20->156 1sp8A2 d.32.1.3 * 2.7e-31 42.1 %
:HMM:PFM   24->153 PF00903 * Glyoxalase 6.9e-14 22.4 125/128  
:BLT:SWISS 37->159 YQJC_BACSU 2e-11 31.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55919.1 GT:GENE BAD55919.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1188218..1188706) GB:FROM 1188218 GB:TO 1188706 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55919.1 LENGTH 162 SQ:AASEQ MSNANQTSESTPGDFIPGDYVVAVDHVGVAVPDLDAAIAWYAENLGMVETHREVNESQGVHEAMLSLPGAPDGATALQLLAPLDESSTIAKFIDRNGPGLQQLAYRVTDIEAVSAYLRGRGLRLLYEAPRHGTADSRINFIHPKDAGGVLVELVEPNPDVTH GT:EXON 1|1-162:0| BL:SWS:NREP 1 BL:SWS:REP 37->159|YQJC_BACSU|2e-11|31.4|118/140| SEG 18->31|gdyvvavdhvgvav| SEG 117->125|lrgrglrll| BL:PDB:NREP 1 BL:PDB:REP 32->155|1jc5F|1e-23|44.7|123/144| RP:PDB:NREP 1 RP:PDB:REP 32->161|1cjxA|7e-11|9.4|127/352| HM:PFM:NREP 1 HM:PFM:REP 24->153|PF00903|6.9e-14|22.4|125/128|Glyoxalase| RP:SCP:NREP 1 RP:SCP:REP 32->156|1jc4A|1e-13|40.8|125/145|d.32.1.4| HM:SCP:REP 20->156|1sp8A2|2.7e-31|42.1|133/0|d.32.1.3|1/1|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase| OP:NHOMO 205 OP:NHOMOORG 200 OP:PATTERN ------1111111111-------1111----1----------------------1111111-----1- -1211-11111-1-11111-11111111111111111111-111---1------------11111111111-----------1-----1111-111-----1-111-111---------------1----11-1--11111---1--------------------------------------111------11--------------------1---111---1------1--------------------------------------------------------------------------------------------11----------------------------1---1-1--11-112-1--1-----------1------------1111111111--11-11-11-------1-1---111-----1--1-11-11-------------1-1-------------------------------111-------------------------------------------------------------------------111-----------1111111-21111-1-1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------111-1-1----11 ---------------------------------------------------------------------------------------------------------------211111-----1----1-11---1---------------1----12111---11---------1-----------------------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 131 STR:RPRED 80.9 SQ:SECSTR ###############################THHHHHHHHHHHHHccEEEEEEEEEccccEEEEEEEEcTTcccEEEEEEEcTTcccHHHHHHHHHcccccEEEEEEccHHHHHHHHHHTTccccccccHHHHHTHHHHcTTcEcTcccHHHHHHHTcEEEc DISOP:02AL 1-15, 158-162| PSIPRED cccccccccccccccccccccEEEEEEEEEcccHHHHHHHHHHHcccEEEEEEEcccccEEEEEEEEEccccccEEEEEEcccccccccccccccccccEEEEEEEcccHHHHHHHHHHcccEEEcccccccccccEEEEEEccccccEEEEEEEccccccc //