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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55933.1
DDBJ      :             putative peptidase
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  155/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
d.154.1
:352 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->275 2drhB PDBj 7e-07 34.7 %
:RPS:PDB   5->328 2drhB PDBj 5e-22 23.5 %
:RPS:SCOP  1->328 1b65A  d.154.1.1 * 4e-45 26.1 %
:HMM:SCOP  1->352 1b65A_ d.154.1.1 * 2.4e-84 48.3 %
:RPS:PFM   9->299 PF03576 * Peptidase_S58 8e-35 49.1 %
:HMM:PFM   9->343 PF03576 * Peptidase_S58 4.5e-74 38.2 304/326  
:BLT:SWISS 9->292 Y1368_MYCBO 2e-50 47.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55933.1 GT:GENE BAD55933.1 GT:PRODUCT putative peptidase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1205874..1206932 GB:FROM 1205874 GB:TO 1206932 GB:DIRECTION + GB:PRODUCT putative peptidase GB:PROTEIN_ID BAD55933.1 LENGTH 352 SQ:AASEQ MTAVPGPRDALTDVAGLLVGHHHVLDADASLGAGAATGCTVVRAPGGVTAAVDVRGGGPGTRETDLLDPANTVRQVHALLLTGGSAYGLAAADGVMRWLEEHGEGIPMDPAEPARVVPIVPGAVIFDLPVGAWDIRPTAEFGRLAAQAAGTEFARGSVGAGTGARAGSIKGGVGTASVVLGDGPAAGVTVAALVVANPVGSVFDPRTGLPWGVGTDGPERFGLRPPTPEQLAAANALPVKGTVLNTTIGVVATDAALDPAGCRRMATTAHDGLARAIRPAHSPLDGDTLFGVATGAVQPPGFPLPSAFPAELLVLDAVCTAAAVCVERAVVDAVLTATTVAGVPAYRDLFPS GT:EXON 1|1-352:0| BL:SWS:NREP 1 BL:SWS:REP 9->292|Y1368_MYCBO|2e-50|47.4|274/344| SEG 25->36|ldadaslgagaa| SEG 185->196|aagvtvaalvva| SEG 329->345|avvdavltattvagvpa| BL:PDB:NREP 1 BL:PDB:REP 5->275|2drhB|7e-07|34.7|236/353| RP:PDB:NREP 1 RP:PDB:REP 5->328|2drhB|5e-22|23.5|293/353| RP:PFM:NREP 1 RP:PFM:REP 9->299|PF03576|8e-35|49.1|265/307|Peptidase_S58| HM:PFM:NREP 1 HM:PFM:REP 9->343|PF03576|4.5e-74|38.2|304/326|Peptidase_S58| RP:SCP:NREP 1 RP:SCP:REP 1->328|1b65A|4e-45|26.1|295/363|d.154.1.1| HM:SCP:REP 1->352|1b65A_|2.4e-84|48.3|327/367|d.154.1.1|1/1|DmpA/ArgJ-like| OP:NHOMO 168 OP:NHOMOORG 165 OP:PATTERN -------11111111----------------------------------------------------- --1---1111-1-111111-11111111111111111111-1--1--1----111--1------111111----------1-1-----------------------------------------------------11111----1--------------------------------------1111---------------------------------1---------2--------------------------------------------------------------------------------------------1----------1-1-1111111---1-111---------1----1----1--1111-----111111111111111111111111-11111111111-11111111111111211111----111-----------1--1-----------------------------------1----------------------------------------1111---11-----------------------1-----------------------------1----------------------------------------------------------------------------------------------------------------11-----------------1-------------------------------------------------------------------------1--------------------------------------------------1--------------------------------------------1---------- -------------------------------------------------------------------------------------------------------------2------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 328 STR:RPRED 93.2 SQ:SECSTR ccccccccccGGGcTTcEEEEEEEEEccccccTTTcEEEEEEEcccccTTTEEEEEEEcccccccHHHHHHHcEEcccEEEEEGGGHHHHHHHHHHHHHHHcTTcTTTccccccEEEEEccTTcEccTTccGGGccccHHHHHHHHHHccccccccccGGGTTcEETTEEcEEEEEEEEEEEETTEEEEEEEEEEEccccGGGcccTTccHHHHTTTccccccGGGcccTTccHHHHTTTccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHTTccccTTcccEEEEEEEEEEEETTcccccccccccGGGcHHHHHHHHHHHHH######################## DISOP:02AL 236-237, 348-349| PSIPRED ccccccccccccccccEEEEEEEEccccccccccccccEEEEEcccccEEEEEEEcccccccHHHEEccccccEEcccEEEEccHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEcccHHHHHHccccccccHHHHHHHHHHHccccccccccccccccEEEEEcccccccEEEEEEcccccEEEEEEEEEccccccEEccccEEEccccccccccccccccHHHHHHHHcccccccccccEEEEEEEcccccHHHHHHHHHHHcccEEcEEEEEEEcccHHEEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHcccc //